Halobacteriovorax marinus: BMS_0281
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Entry
BMS_0281 CDS
T01659
Symbol
groL
Name
(GenBank) 60 kDa chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
bmx
Halobacteriovorax marinus
Pathway
bmx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bmx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BMS_0281 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bmx03019
]
BMS_0281 (groL)
03110 Chaperones and folding catalysts [BR:
bmx03110
]
BMS_0281 (groL)
03029 Mitochondrial biogenesis [BR:
bmx03029
]
BMS_0281 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bmx04147
]
BMS_0281 (groL)
Enzymes [BR:
bmx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
BMS_0281 (groL)
Messenger RNA biogenesis [BR:
bmx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
BMS_0281 (groL)
Chaperones and folding catalysts [BR:
bmx03110
]
Heat shock proteins
HSP60 / Chaperonin
BMS_0281 (groL)
Mitochondrial biogenesis [BR:
bmx03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
BMS_0281 (groL)
Exosome [BR:
bmx04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
BMS_0281 (groL)
Exosomal proteins of other body fluids (saliva and urine)
BMS_0281 (groL)
Exosomal proteins of breast cancer cells
BMS_0281 (groL)
Exosomal proteins of colorectal cancer cells
BMS_0281 (groL)
Exosomal proteins of bladder cancer cells
BMS_0281 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Lar_N
Motif
Other DBs
NCBI-ProteinID:
CBW25209
UniProt:
E1X3B4
LinkDB
All DBs
Position
296645..298291
Genome browser
AA seq
548 aa
AA seq
DB search
MAKELKYSEDARSLILNGVNTLANAVKVTLGPKGRNVVIQKSFGAPHITKDGVSVAKEIE
IENNFENMGAQMVKEVAQKTNEDAGDGTTTATVLAQAIYREGVKLVTAGHNPMDLKRGID
IAVEKVVSKLQEMSKEVKTSEEIAQVGTISANNDTEIGTLISEAMAKVGNNGVITIEESK
TAETTLDVVEGMQFDRGYLSPYFVTNPEKMETNFDSPMILITDKKIANMKELVPVLEKVV
QASKPLLIIAEDVEGEALTTLVVNKLRGTLNVCAVKAPGFGDRRKEMLKDIAILTGGTVI
SEELGMSLESTELEHLGSAKKVTIDKENSTIVDGAGDKDAVDARVATIQKQVEESSSDYD
KEKLQERLAKLSGGVAVINVGAPTETEMKEKKDRVEDALNATRAAVEEGIVVGGGSALVH
ASTVLDGLEGANAEETFGIKIVKRAAEEPLRQISANAGLEGSVVVNDVKRKGDVTYGFNA
RLGKYEDLVAAGIIDPTKVTRSALQNAASVSGLMLTTETMIADLPKEDAAPAGMPGGMGG
MGGMPGMM
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagaattaaaatatagcgaagacgcaagatcacttatccttaacggagttaat
actttagcaaacgcagttaaagtaactcttggacctaaaggaagaaatgtagttatccaa
aaatcatttggtgctccacacattactaaagatggtgtttctgtagctaaagaaattgaa
attgaaaataactttgaaaatatgggcgcacagatggttaaagaagtcgctcaaaagact
aatgaagatgcaggtgatggaacgacgacagcaacagttctagctcaagcgatctataga
gaaggtgtaaagcttgttactgctggtcacaacccaatggatcttaagagaggaattgat
attgctgttgagaaagtagtttctaaacttcaggaaatgtctaaagaagttaagacttct
gaagagattgctcaggtaggaacaatttctgcaaacaatgacactgaaattggaacactt
atctctgaagcaatggcgaaagttggtaataacggtgttatcacaattgaagagtctaag
actgctgagacaactcttgatgttgttgaaggtatgcaatttgatagaggatacctttct
ccatacttcgtaactaatccagaaaaaatggaaactaactttgattcaccaatgattctt
attactgataagaaaattgcaaacatgaaagaattagttcctgttcttgaaaaagttgta
caagcttctaagccacttttaattattgctgaagatgttgaaggtgaagcccttacaact
ctagttgttaataagttaagaggaactttaaatgtttgtgcggttaaagcgccaggattt
ggagatagaagaaaagaaatgcttaaagatattgcaatcctaactggtggtactgttatc
tctgaagagctaggtatgtctcttgagtctacagagcttgagcacttaggttctgctaag
aaagttactattgataaagaaaactctacaattgttgacggtgcaggagataaagatgca
gttgatgcaagagttgcaacgattcaaaagcaagtagaagagtcatcttctgactatgac
aaagaaaaacttcaagaaagattagctaagctttctggtggtgttgctgtaattaacgtt
ggcgctccaactgaaacagaaatgaaagaaaagaaagatagagtagaagatgctcttaac
gctactagagcagcagttgaagaaggaattgttgttggtggtggttcagctctagttcac
gcttctacagttcttgatggacttgaaggtgcaaatgctgaagaaacttttggtattaaa
attgttaagagagctgcagaagagccactaagacaaatctcagcaaacgctgggcttgaa
ggttctgtagttgttaatgatgtaaagagaaagggtgatgtaacttacggtttcaatgcg
agacttggtaagtatgaagatctagttgctgcagggattatcgatcctacaaaagtaaca
agatcagctcttcaaaatgctgcatctgtttcaggattaatgcttacgactgaaacaatg
atcgcagatcttcctaaggaagacgccgctcctgccggaatgcctggtggaatgggtggt
atgggcggaatgcctggcatgatgtag
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