Halobacteriovorax marinus: BMS_0566
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Entry
BMS_0566 CDS
T01659
Name
(GenBank) RNA polymerase sigma factor WhiG
KO
K02405
RNA polymerase sigma factor FliA
Organism
bmx
Halobacteriovorax marinus
Pathway
bmx02020
Two-component system
bmx02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bmx00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BMS_0566
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
BMS_0566
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bmx03021
]
BMS_0566
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
bmx02035
]
BMS_0566
Transcription machinery [BR:
bmx03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BMS_0566
Bacterial motility proteins [BR:
bmx02035
]
Flagellar system
Flagellar assembly proteins
Stator
BMS_0566
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
UPF0122
PhyR_sigma-like
LcrG
GerE
HTH_23
Motif
Other DBs
NCBI-ProteinID:
CBW25476
UniProt:
E1X4P6
LinkDB
All DBs
Position
589314..590096
Genome browser
AA seq
260 aa
AA seq
DB search
MSSISKKLKNLKDYRSTVDPKVKDEIIIEYAPLIKYIAQRIASRLPSNVELDDLISCGVI
GLMDAIEKFDPSRDNKFKTYAEFRIRGSILDELRAQDWVPRSVREKAKLVERAYAKIEAA
EGRPATDEEMCAELGVNQEEFYDLLNKAKSVSVLNIDDSASFNKGDKKLIAGLEDNRNSN
PFHAVANKGSRDKIKEGIAQLPEKQRLVLSLYYYEDLNLKEIGQVLNVTESRVSQLHTQA
IMKLKVKLKTTFDSPEDIAS
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcaatctctaagaaattaaaaaacttaaaagactatagatcaacagttgatcca
aaagtaaaagatgaaatcattattgagtacgctccactaattaaatatattgcacaaaga
attgcttctagacttccgtctaatgtggagctagatgaccttatttcttgtggtgtgatc
ggtctaatggatgcaatcgaaaaatttgatccaagtagagataataaatttaaaacatat
gctgaatttagaattagaggttcaatcctagatgagcttagagctcaagactgggtccct
agatcagtaagagaaaaggctaagcttgttgaaagggcctacgcaaaaattgaagccgct
gaaggtagaccagctacagatgaagaaatgtgtgcagagcttggagtaaatcaagaagag
ttctatgatcttttaaataaagcaaagtctgtttctgttttaaatattgatgactcagct
tcatttaataagggcgataagaagcttatcgctggattagaagacaatagaaatagtaat
ccatttcatgcagtagcaaataagggttctagagataagatcaaagagggaattgctcag
cttccagagaagcaaagactagttctttctctgtactactatgaagatttgaaccttaaa
gaaatcggtcaagttctaaacgtaacagagtcgagagtttctcagcttcacactcaagct
attatgaagctaaaggtgaagttaaaaactacttttgactcacctgaagatattgctagc
taa
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