Halobacteriovorax marinus: BMS_0670
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Entry
BMS_0670 CDS
T01659
Name
(GenBank) putative DNA polymerase III PolC-type alpha subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
bmx
Halobacteriovorax marinus
Pathway
bmx03030
DNA replication
bmx03430
Mismatch repair
bmx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bmx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BMS_0670
03430 Mismatch repair
BMS_0670
03440 Homologous recombination
BMS_0670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bmx03032
]
BMS_0670
03400 DNA repair and recombination proteins [BR:
bmx03400
]
BMS_0670
Enzymes [BR:
bmx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BMS_0670
DNA replication proteins [BR:
bmx03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BMS_0670
DNA repair and recombination proteins [BR:
bmx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BMS_0670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Spore_Cse60
Motif
Other DBs
NCBI-ProteinID:
CBW25576
UniProt:
E1X5A4
LinkDB
All DBs
Position
complement(690347..691234)
Genome browser
AA seq
295 aa
AA seq
DB search
MAHFTEAEREILLRSFPNGIVALDLETTGLSPLIDKVIELSAIKVTPYGEEVFDELIDPK
IEIPKFTIDIHGITNDMVQGKRTLDKVLPEFINFIGSLPLVAHNAKFDLGFIVFGMHQIG
LPLHESHVYCSCKFSRYALRGSTNFKLSTLTTELEIPLENHHRALDDAIACLKVYERGLR
VFKKPDRKILNEGHLFKLKDFDKQDDFEIPKKLKPLQDKVKDQEMIEIKYRGGSLKNQFR
PIRPISFLPMPQGNMLYAHCLVSDMYKSFSLKKIAELRELSDEQKNELKAKMVKK
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atggcccacttcaccgaagctgaaagagaaattctcctaagatcttttcccaacggaatt
gtcgctctagatttagagaccacgggcctctcaccccttatagacaaggtgatagagctt
tcggccataaaagtgacgccttacggtgaagaagtttttgacgagttaatagatccaaaa
attgaaattccaaaatttactattgatattcatggcatcacaaacgacatggtgcaagga
aagagaaccctcgacaaagttctccctgagtttataaattttattggaagtcttccccta
gtagcacacaatgcgaaatttgatttaggttttatcgtatttggaatgcaccaaattggt
cttcctcttcacgaatcccacgtctattgttcatgtaaattttcaagatatgccctaaga
ggtagtacaaattttaaactttcaactttaacgactgagctagaaatcccactagagaat
catcaccgcgccctagatgatgctatagcttgcttaaaagtttatgagagaggattaaga
gtttttaaaaagcctgatcgtaaaatacttaatgaaggccatctctttaaattaaaagac
tttgataaacaagatgactttgaaattccaaaaaaacttaaaccacttcaagacaaagtg
aaagatcaagagatgattgaaataaagtaccgcggtggaagcctaaagaatcaatttaga
cctattcgcccaatcagctttctcccaatgccacaggggaatatgctctatgcgcactgt
cttgttagtgatatgtacaaatcgttctcgttaaaaaagatagcagagttaagagagcta
tcagatgaacaaaagaatgaacttaaagcaaagatggtaaagaaatga
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