Halobacteriovorax marinus: BMS_0947
Help
Entry
BMS_0947 CDS
T01659
Symbol
rhlE
Name
(GenBank) putative ATP-dependent RNA helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
bmx
Halobacteriovorax marinus
Pathway
bmx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bmx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BMS_0947 (rhlE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bmx03019
]
BMS_0947 (rhlE)
Enzymes [BR:
bmx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BMS_0947 (rhlE)
Messenger RNA biogenesis [BR:
bmx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BMS_0947 (rhlE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
CBW25834
UniProt:
E1WXM8
LinkDB
All DBs
Position
924258..925553
Genome browser
AA seq
431 aa
AA seq
DB search
MTQFKDLKLSSKLLKTLADKGYSTPTDIQREAIPLILEGRDIQGIAQTGSGKTGAFSIPM
IENLSRSKQVVKAKRARALILTPTRELANQINGQVEIYSKGMNLSSAVIFGGDGPLNQVR
KLATGVDLLIATPGRLLDFLQRGHIKLDELETFVLDEADRMLDMGFIKDIEKIIERLPKK
RQTLFFSATMPKDISKLASTILTRPKIIEVSPPSTPVESIAQYLIHIDRVQKPKLLKKII
NESVSESVIVFTRTKYGADRVCKHLMKAGIESSSIHSNRSQGAREKALAAFRNKKIKALV
ATDIAARGIDVDGISHVINYDVPLEAESYIHRIGRTARAGKSGVAYTFCDPAETKSLKAV
EKLLGFKIKVNSDFEITEETDTIPPINNPGRKLRNPNLTKKKANKKSQKKVIKPKAPSKK
RFSGKKKPTKS
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgactcaatttaaagatctcaaactcagtagcaaattattaaagactctagccgataaa
ggctattcaaccccaacagatattcaacgagaggccatcccacttattttagagggaagg
gatattcaaggaattgcacaaacaggctctggtaagacgggagctttttcaattccaatg
atcgaaaatctttctcgttctaagcaagtagtgaaggccaagagagcaagggcccttata
cttactcctacgcgagagttggcgaatcaaattaatgggcaggttgagatttactctaag
ggtatgaatttgtcttcagctgtgatctttggtggagatggtccattaaatcaagtgaga
aagcttgcaactggagttgatcttttgattgcgacaccgggacgtttattggactttcta
caaagaggtcatattaagctagatgagttggaaacttttgttcttgatgaagcagataga
atgcttgatatgggattcatcaaagatatcgaaaaaattatcgagagactaccaaagaag
aggcagactctttttttctctgcaacgatgccaaaggatatctctaagttagcaagcacg
attctaactaggcctaagattattgaagtctctcctccatcaactccggtagaatctatt
gctcaatatttaattcatattgatagagtacagaagccaaaacttttaaagaagatcatt
aatgaatctgttagtgagagtgtgattgtttttactagaaccaagtacggtgctgataga
gtgtgtaagcacttaatgaaagcaggaatagagtctagctcgattcacagcaatagaagt
caaggtgccagagagaaggcattggctgcttttagaaataagaaaattaaggcccttgtc
gctacggatatagctgcgagaggaattgatgtagatggaattagtcatgtgataaattat
gatgttcctctagaggccgagagctatattcatagaataggtagaactgccagagcaggt
aagtctggtgtggcctatactttctgtgatcctgcagagacgaagtctttaaaggccgtt
gagaaattactaggctttaaaattaaggttaattcagactttgaaattacggaagaaact
gacactattcctccaataaataatccgggacgaaagcttcgaaatcctaaccttacaaag
aagaaagcgaataaaaaatctcaaaagaaagtgattaaaccaaaagctccctctaagaag
aggttttcaggcaagaaaaaacctaccaagtcttag
DBGET
integrated database retrieval system
