Halobacteriovorax marinus: BMS_1506
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Entry
BMS_1506 CDS
T01659
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma-32 factor
KO
K03089
RNA polymerase sigma-32 factor
Organism
bmx
Halobacteriovorax marinus
Brite
KEGG Orthology (KO) [BR:
bmx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bmx03021
]
BMS_1506 (rpoH)
Transcription machinery [BR:
bmx03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BMS_1506 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
KORA
Phage_RBD_prop
DUF5572
Motif
Other DBs
NCBI-ProteinID:
CBW26363
UniProt:
E1X0D5
LinkDB
All DBs
Position
1486255..1487307
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AA seq
350 aa
AA seq
DB search
MPNFNGRNMSENKKDKKHSDTVVEVLSTEDLLSENESKTLADIEISLKKSNEDAQDLLPA
LTSSKDLVKYDSKIGDPLTAYLREISKYELLTIEEERELTQKLVETGDIEVAKKLVAANL
RLVVKIAMEYRSSFQNVMDLIQEGNIGLMKAVSKYDPDKGAKLSYYASWWIKSYILKYIL
DNFRLVKIGTTNEQKKLFYNLMKEKDRLAKQGIEPDHKLLSENLGVSEKAVALMDGRMSS
SGGELSLETPLGHDSGSGVLSDILVDQDESDISEKIADAQGLEILQENLRDFVSGLKERD
RDIFKKRLLSEVPPSLQNIADEYGVSRERIRQIEERLLKNLKVYMSEFIR
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
ttgccaaactttaatggtcgaaatatgtcagaaaataaaaaagataaaaagcacagcgat
acagttgttgaggtactaagtactgaagatcttctttcagaaaatgagagtaagacgctt
gcagatattgagatctccttaaaaaaatctaatgaagatgcccaagaccttcttcccgca
ctaacgagttctaaagatctcgttaagtatgatagtaaaattggtgatcctcttacggca
tatcttagagagatatccaagtatgagcttctaactattgaagaggagagagagctgact
cagaagttagttgagacaggtgatatcgaagttgctaagaaattagtggccgccaactta
aggttagtcgttaaaattgccatggagtatagaagttcatttcaaaatgttatggacctt
attcaagaaggaaatattggtctcatgaaggccgtctcaaaatatgatccagataaaggc
gctaagctttcgtactatgcgagctggtggataaagtcctatatcttaaagtatattctc
gataattttcgcttggttaagattggaacaactaatgagcagaagaaactcttctataat
ctcatgaaagagaaagatcgcttggccaagcaggggatagaaccagatcataaattgctc
tctgagaaccttggggtttctgaaaaggcagttgcacttatggatgggcgaatgtctagc
tcgggtggagaactaagtttagagacaccacttggacatgactctggctcgggtgtactt
tcggatattcttgtagatcaggatgagagtgatatttctgaaaaaattgcagatgctcaa
gggcttgagattctccaagaaaatcttagagactttgtttcaggacttaaagagagagat
agagatatctttaaaaaacggttacttagcgaagttcctccctcccttcaaaatattgca
gatgaatacggtgtgtcacgagagagaatacgccagatcgaagagcgactcctaaagaat
ttaaaggtttacatgtctgagtttattagataa
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