Halobacteriovorax marinus: BMS_1986
Help
Entry
BMS_1986 CDS
T01659
Symbol
rep
Name
(GenBank) Rep helicase, a single-stranded DNA-dependent ATPase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bmx
Halobacteriovorax marinus
Pathway
bmx03420
Nucleotide excision repair
bmx03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bmx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BMS_1986 (rep)
03430 Mismatch repair
BMS_1986 (rep)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bmx03400
]
BMS_1986 (rep)
Enzymes [BR:
bmx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BMS_1986 (rep)
DNA repair and recombination proteins [BR:
bmx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BMS_1986 (rep)
MMR (mismatch excision repair)
Other MMR factors
BMS_1986 (rep)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_12
AAA_11
AAA_14
DEAD
Terminase_6N
Motif
Other DBs
NCBI-ProteinID:
CBW26800
UniProt:
E1X2N2
LinkDB
All DBs
Position
1995737..1997788
Genome browser
AA seq
683 aa
AA seq
DB search
MISLSGLNAAQRQAAETIDGPLLILAGAGSGKTRTITYRIAHMVDNLALPQKSILAVSFT
NKAAKEMRERIIGLLGKKKARGLTMATFHSLGVKILKKEISKLGYHKNFSIYDSADQSAI
MREALKSFKAGKQFDQKIIMAKIGKLKNQGIGPDDYADSEYFDDEDPYDHATHYVYDYYQ
DKLKFYNAIDFDDILFLTVKLFTDFPEVAKQYSEQFRYIMIDEYQDTNNLQFDLITGLTS
THNNLCVVGDDDQAIYSFRGADITNILSFERMFPGAKVVKLEENYRSVSSILELANKVIK
ENINRRDKTLWSQRKSSHTPLLWSMANTEHEAEVISDEISKHQSNGGHLGDIAVLYRSNT
QAQPFEEVFRMNQIPYTIIGGQKFYEKKEVKDLMAYLTVILNPKDQLQLRRILNIPNRGI
GSRTLEKYLEKSEQEDISLYEALYRYPDLDPNREKHIRDFTGIITKFKEVFDLQSLPEAI
SKLVEDIGFYEFIDKSYDSAKQVERRRNDVNFFIESAERFVKYNGAHATLKNFVEKLLLQ
DNQDTEEDEDDDIRKNEVTMMTFHSSKGLEFDTVYMVGVEEESLPHKNTIKNGEDISEER
RLCYVGITRAQQKLIMTYCKERKLYGKDTPRFISRFINELDKDGFCVHQDRTTFGHMTEE
EADDYKKGFFANLIDGLDDDSMF
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgatttcattgagtggactaaatgctgcacagagacaagcagcagaaacgattgatggg
cctcttctaatattggccggtgcaggtagtggtaaaactagaaccattacctaccgtatt
gcccatatggtggacaatctcgctcttccacaaaagtccattctcgctgttagtttcact
aataaagcggccaaagaaatgcgtgaaagaatcataggcctgctgggtaagaaaaaggca
agaggccttaccatggctacatttcactctctgggagtgaagattttgaaaaaagaaatt
tcaaaattaggctatcacaagaatttttcaatttacgattctgctgatcaatcggccatt
atgcgcgaggccctaaagagttttaaggccggtaagcaatttgatcaaaagatcattatg
gcaaaaattggtaaattaaagaatcagggaattggaccagatgactatgctgatagtgag
tactttgatgacgaagatccttatgatcacgcaactcattacgtctatgactattaccaa
gacaaattgaagttttacaatgccattgattttgatgacattctctttttaacggtaaag
ctatttacagattttccagaagtggccaagcaatactctgagcagtttcgctatatcatg
atcgatgaataccaagatactaataatcttcaatttgatcttatcactggactgacttct
actcataataacctctgtgttgtgggtgatgacgatcaagcgatctactcatttagaggt
gcagacattacaaatatcctaagctttgaaagaatgttcccaggagcaaaggttgttaaa
ctagaagaaaattatagatctgttagctcaattttagagcttgccaataaagtgattaaa
gaaaatataaaccgaagagataagacactttggtcacagagaaagagctcacacacacct
cttctttggtctatggccaatacagaacatgaggcagaagttatttctgatgagatctct
aaacatcaatccaatggagggcaccttggtgacattgctgttctctacagatcaaataca
caggcccaaccttttgaagaagtttttagaatgaatcaaatcccctacacaattataggt
ggacagaaattctatgaaaaaaaagaagttaaggatttgatggcctacttaacagtaatc
ctaaatccaaaagaccaacttcaactaagaagaattctcaatatccctaaccgtgggatt
ggatcaagaactcttgagaagtatttggaaaagtctgagcaagaagatatctcactctac
gaagctctctaccgctatccagacttagacccaaatagagaaaaacatattagagacttc
acgggaatcattacaaagttcaaagaggtctttgatcttcaatctctgccagaggcgata
agtaaattagttgaagatattggattctacgaatttattgataagtcttacgacagtgcc
aaacaagtagagagaagacgcaatgatgtaaatttctttatagagtcagcggagagattt
gttaaatataacggagcccacgcgactctaaagaactttgtagaaaaactactcctccaa
gataaccaagatacagaagaagatgaggacgacgacattagaaagaacgaagtcactatg
atgactttccattcatctaagggtcttgaatttgatacggtctatatggttggcgtagaa
gaagaaagcttaccgcataagaataccattaaaaatggagaggatatttctgaagaaaga
cgcctctgctatgtgggaattacacgtgctcaacaaaagctcataatgacctactgtaaa
gagagaaagctctacgggaaagatactcctcgcttcattagtcgctttatcaacgaacta
gataaagatggtttctgtgtccatcaagatagaacaaccttcgggcatatgactgaagaa
gaggccgacgactacaagaaaggattctttgccaacctcatcgatggactagatgatgat
tcgatgttttaa
DBGET
integrated database retrieval system
