Halobacteriovorax marinus: BMS_2117
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Entry
BMS_2117 CDS
T01659
Symbol
hupB
Name
(GenBank) DNA-binding protein HU-beta
KO
K03530
DNA-binding protein HU-beta
Organism
bmx
Halobacteriovorax marinus
Brite
KEGG Orthology (KO) [BR:
bmx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bmx03032
]
BMS_2117 (hupB)
03036 Chromosome and associated proteins [BR:
bmx03036
]
BMS_2117 (hupB)
03400 DNA repair and recombination proteins [BR:
bmx03400
]
BMS_2117 (hupB)
DNA replication proteins [BR:
bmx03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
BMS_2117 (hupB)
Chromosome and associated proteins [BR:
bmx03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
BMS_2117 (hupB)
DNA repair and recombination proteins [BR:
bmx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
BMS_2117 (hupB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
CBW26925
UniProt:
E1X3J6
LinkDB
All DBs
Position
complement(2130591..2130869)
Genome browser
AA seq
92 aa
AA seq
DB search
MNKKELLETILKNKELNHMTKKDAELFLNTTIDTIKKTVKKGEDVSLIGFGSFSKVRRAA
RAGVNPATGEKIKIKAKNLPKFKPGKAWKDMF
NT seq
279 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaaaagaactattagaaacaattcttaagaacaaagaacttaaccacatgact
aagaaagacgctgagcttttccttaacactactattgatacaatcaagaaaactgttaag
aaaggtgaagatgtttctctaatcggttttggttctttctctaaagtaagaagagctgct
agagcaggtgttaacccagcgactggtgagaagattaaaatcaaagctaagaatcttcca
aagttcaagccaggtaaagcttggaaagatatgttctaa
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