Halobacteriovorax marinus: BMS_2439
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Entry
BMS_2439 CDS
T01659
Symbol
hepA
Name
(GenBank) RNA polymerase associated protein
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
bmx
Halobacteriovorax marinus
Brite
KEGG Orthology (KO) [BR:
bmx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bmx03021
]
BMS_2439 (hepA)
Transcription machinery [BR:
bmx03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
BMS_2439 (hepA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapA_C
Tudor_1_RapA
SNF2-rel_dom
Helicase_C
Tudor_RapA
ResIII
DEAD
Cas3-like_C_2
AAA_22
AAA_34
Motif
Other DBs
NCBI-ProteinID:
CBW27234
UniProt:
E1X508
LinkDB
All DBs
Position
complement(2450565..2453270)
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AA seq
901 aa
AA seq
DB search
MNKFTIGQRWISEAEPELGLGIINNLTDKTVSIVFSASGIERNYGIKTCPIKRVLFGPGD
EILIEEGERLLVDKVTEQDGLAFYLCGERIISELDLSDLMSFNKPEDKLLNGLCDPHEHF
QLRYETLKYKNEYSALDVKGLLGPRVSLIPHQLYVAKEVFNRPIPRVLLADEVGLGKTIE
AAMIIHQMLISKRAQRILIVVPDSLVFQWFIELHRKFALSFTVVNQETELAPGTNPFLDN
ENIIVSLGLLRGAERARELLNQADFDMLVVDEAHHLKWSREEASVEYKLVESLAARISGV
LLLTATPEQLGLEGHFSRLKILDPDRFFSYEDFVKEHESFEHFAGIVRKIEGGVDLDVEE
KELLTSVGIDANQEKEEIISSLLDRHGTGRIYIRNTRERMKEVFDFFPQRILNEDLIDLD
AKTDNLDVNIFRSKAFWLIEKLQDLKGEKALLICKSKAKVLALEKFIRENATSTNTAVFH
SDLSLMARDRQAAYFADNNGAQILLCTEIGSEGRNFEFASNLILFDLPSNPDYLEQRIGR
LDRIGQKRDIQIHVPLVKESSEHLLFRWYQEGFNAFTDAAKCGGILFRKFKDEVEDIENQ
DIDSLIERTRAEYKLVSKELEEGRDVLIEKNSYKSDKALSIRSEIRDIDQSRELRNFLDS
VFHHLGVDSDDINEDTLFLRPTDNMLLPHFPELDRDGKTYTFNRLMALEREEFGFLTWDH
PMVQGVSDLIISESIGSYSVAKRRESKGTKIFFEFFFIFETIHNQELESNKYFPPKVIRV
LLDNKGEDFSEKWDKSFLDSKVSGGDRDDILKVSKFPKAGVTKIITKANEVAREIAARDK
DLFKQNLTKLIARDVERLTYLKSINSSVKDEELQWLEMKKSELLSILDQSSVKLDSFRVI
L
NT seq
2706 nt
NT seq
+upstream
nt +downstream
nt
atgaataaatttacaattggtcaaagatggatcagtgaggccgagccagagcttggcctt
ggtattattaataatcttacagataaaacagtctccatcgttttctctgccagtggaatc
gagagaaattacggtattaaaacctgtccaataaagagagtactctttggtccaggagat
gagattcttattgaggaaggcgagcgtcttttggttgataaggttacagagcaagatgga
cttgctttctacttatgcggggaaagaattatttctgaactcgaccttagtgacttaatg
tctttcaataagcccgaagataaattattaaatggtctctgcgatcctcacgaacatttt
caacttcgctatgaaactttaaagtacaaaaatgaatatagtgctctagatgtgaagggg
ctgcttggccctagagtgagcttaattcctcaccagctctatgttgcaaaagaagtcttt
aatagacctattcctagagttttattggccgatgaagttggtttaggaaagaccattgaa
gcggccatgatcatacatcaaatgcttatttctaaaagggcgcagagaattttaattgta
gttcctgactctttggtatttcagtggttcattgagctacacagaaaatttgctctatcg
tttacagtcgtaaatcaagagaccgagcttgctccaggaacaaatccttttctagacaat
gagaatatcatcgtttcccttgggcttttaagaggtgccgaaagagcaagagagcttcta
aatcaagcagattttgacatgctcgttgttgatgaagcccaccacttaaagtggagtaga
gaagaggcttctgttgagtataaattagttgaaagtcttgctgcaagaattagtggagtt
ttattactaacggcaactcctgaacaattagggctagaggggcactttagccgtttgaaa
attttagaccccgatagattcttctcctatgaagactttgtaaaagagcatgagagcttt
gagcactttgctggtatcgttagaaagattgagggaggagttgacttagacgtagaagaa
aaggaacttctcaccagtgttggaattgatgcgaaccaagagaaggaagagatcatttca
tctctgctcgataggcatggtactggtcgtatttatattagaaatacaagagagagaatg
aaagaggtttttgatttctttcctcagagaattttaaatgaagacttaattgatctagat
gcaaaaactgataatttagatgtaaatatctttcgctctaaggccttttggttaattgaa
aaattacaagacttaaaaggagagaaagcacttctcatttgtaagtcaaaagcaaaggtc
ttagctcttgaaaaatttattagagaaaatgcgacaagcactaatactgcagtctttcac
tctgatctctcgcttatggcgcgtgaccgccaagccgcttactttgcagataataatgga
gcgcaaattcttctgtgtactgaaattggatcggaaggaagaaattttgaattcgcctct
aatttaatcctcttcgatctaccgtctaatcctgattacctagagcagagaattggtcga
ttagataggattggtcaaaagcgagatattcaaatccatgtccctcttgttaaagaatca
agtgagcacttactttttagatggtatcaagaaggtttcaacgcttttactgatgccgcc
aagtgcgggggaattctttttagaaagtttaaagatgaagttgaagatattgaaaatcaa
gatattgattctttaattgaaagaacgagagcagagtacaaacttgtttctaaagaacta
gaagagggaagagatgtcctcatcgagaagaactcttataagtctgataaggcgcttagt
attcgttcagaaataagagatattgatcaatcaagagagttaagaaatttcttagactct
gtcttccatcacttaggtgtagactctgacgatataaatgaagatacgctctttttaagg
cctactgacaatatgcttcttcctcactttccagaactagatagggacggcaagacatat
acttttaatagattaatggcgcttgagcgagaagagtttggtttcttaacttgggaccat
cctatggttcaaggtgtaagtgatcttattataagtgagagtattggctcatatagtgtt
gcaaagagaagagagagtaagggaactaagattttctttgaattcttttttatttttgaa
actattcacaatcaagaactagaatcgaataagtacttccctcctaaggttattagggtg
cttctagataataagggtgaagacttctctgagaagtgggataagtctttcctagactct
aaggtaagtggtggggaccgcgatgatattttgaaagtatctaagttccctaaggccggt
gtgactaagatcatcactaaggccaatgaagttgccagagaaatagcagcgagagataag
gacttatttaagcaaaacttaactaagttgatagctagggacgttgaacgtctgacatat
cttaagtctataaattcatcagtaaaagatgaagagctacaatggctagaaatgaaaaag
agtgaactcttatctattcttgatcaaagtagcgtaaagctagatagttttagagtgatc
ctttag
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