Halobacteriovorax marinus: BMS_2585
Help
Entry
BMS_2585 CDS
T01659
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
bmx
Halobacteriovorax marinus
Brite
KEGG Orthology (KO) [BR:
bmx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bmx03032
]
BMS_2585 (topA)
03400 DNA repair and recombination proteins [BR:
bmx03400
]
BMS_2585 (topA)
Enzymes [BR:
bmx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
BMS_2585 (topA)
DNA replication proteins [BR:
bmx03032
]
Prokaryotic type
DNA Topoisomerases
BMS_2585 (topA)
DNA repair and recombination proteins [BR:
bmx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BMS_2585 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
DUF2399
Toprim_4
Toprim_2
NPR3
Motif
Other DBs
NCBI-ProteinID:
CBW27372
UniProt:
E1X628
LinkDB
All DBs
Position
complement(2587246..2589819)
Genome browser
AA seq
857 aa
AA seq
DB search
MKRASPFHLNKDVIMASSEAVEETKSSKKTAKKTAKASSKKKTTKKKTTTSKKKTAKKKT
AKTTKKKTTKKRDLGDYSLVIVESPSKAKTIKKYLGKGYQVVASNGHIKDLPKSKLGVDI
KENFQIDLVPITGKKDKIERIQELAKDATAIYLAPDMDREGEAIAHHLAEEIGKKKKMYR
VVFNAVTKSAVNNAIENPTELNKSMYESQQTRRILDRLVGYKISPILWDKVQRGISAGRV
QSVALRIIVEREDEINAFEPEQWFSIHGVCEKDAQKFEVKYYGESATKKTDLTEKDLVDK
ILSDVKGKSLDVIDVKKKERKQNPTPPFTTSKLQQEAANKLGFTAKRTMMTAQKLYEGIQ
LTEHGMQGLITYMRTDSVRTAPEAMGALREFILDKYGKDYLSVEPIEYKKKGSSKVQDAH
EAIRPTNLAFTPDSVRGDLEPDQQKLYELIWNKFISSQMSQAIIDQTTVMMEREGHFFKA
NGSIIKFPGFRTVYLEAAAEKRSRKGGDDEDDNDAGEVKSGLLPVINTGESFTPIEGPTE
QEHWTSPPPRFNEASLVKSLEEFGIGRPSTYAAIISNIQDRGYVEKTENRFLPTELGIVV
CRMLVESFPNVMDIKFTAGVEELLDQIEDGTIKYKKVLKEFWKEFEVTLEKAKEEMKNLK
KQLIPTGINCLKCEDGEYHIKWGRNGQFFACSNYPDCNSTQDFKKHLDGSYEILPKNWFH
DNCPNCQKRLEVKKGKYGRFVRCEDYPQCDTTLPYTLDITCPECNVGKFAEKKSRYGKIF
YGCSNYPNCENASWTKPYVQDCPSCGYGIMGFKETKRDGKHLECAKCKFKLEWEQTKYGK
EELEKQRQEEEALKGSH
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
gtgaagcgtgcttcaccctttcatttaaataaggatgttattatggccagctcagaagct
gttgaagaaacaaagtcttcaaagaaaacagcaaaaaagaccgccaaggcttcttctaaa
aagaagacgacaaagaagaaaacgacaacttctaagaagaaaactgcaaaaaagaaaaca
gcaaagactactaagaagaagactactaagaaaagagatcttggggactatagtcttgtt
attgtggaatcaccatccaaagcgaagacaattaagaaataccttgggaaaggttatcaa
gttgtggcctctaatggtcatattaaagatcttccaaaatctaagcttggtgtcgacatt
aaagagaactttcaaattgaccttgttccaataacaggaaagaaagataaaattgaaaga
attcaagagttggccaaggatgcgactgctatctatcttgctcccgatatggaccgcgag
ggggaggcgatcgctcaccatttagctgaagaaattggaaagaagaagaaaatgtatcgt
gttgtttttaatgcggtaacaaagtctgcagtaaataatgcaatagaaaatccaacagaa
ttaaataagtctatgtatgagtctcaacaaacgagaagaattctagaccgtctggtggga
tataaaatttcaccaatactttgggataaggttcagcgagggatttctgcgggtagagtt
caatctgttgcccttagaattattgttgaaagagaagatgagatcaatgcctttgaacct
gagcagtggttttctattcatggtgtctgcgaaaaagacgcccagaaatttgaagttaaa
tattacggagagtcagcgacaaagaaaactgacttaactgaaaaagatcttgtagataaa
attctttctgatgttaaaggaaagagcctcgatgttattgatgtaaagaagaaggagagg
aaacaaaacccaactcctccatttacaacatcaaagcttcaacaggaagccgctaataag
ttaggctttactgctaagagaacgatgatgacagctcaaaagctctacgaaggtatccag
cttactgagcatggtatgcaaggtcttattacatatatgagaactgactctgttagaact
gctccagaagcaatgggagcactgagagagtttattcttgataagtacggaaaagattat
ttatcggttgagcctatcgagtataagaaaaagggaagctctaaagttcaggatgctcac
gaggccatccgtccaactaacttagcttttacacctgactccgttagaggagatcttgag
cctgatcagcagaagctctatgaacttatttggaataaatttatttcatctcaaatgagt
caagcgattatagatcagactacagttatgatggagcgagaagggcatttctttaaggcc
aatgggtctattattaaattccctggttttagaactgtatacctagaagccgcagcagag
aagagatctcgaaaaggcggagatgatgaggatgataacgatgcaggtgaagtaaagagt
ggactattacctgttataaatacgggagagagttttactccaatcgaaggtccaactgag
caagagcattggacgtcaccacctccaagatttaatgaagcttcacttgttaaatcatta
gaggagtttggtattggtagaccatctacatacgctgcgattatttcaaatattcaagat
agaggatatgttgaaaaaactgaaaaccgcttccttccaactgagttaggaattgtcgtt
tgtagaatgctggtagagagttttccaaacgtaatggatatcaagtttacagcaggtgtt
gaagagctgctggatcaaattgaagacgggacaattaagtataagaaagttttaaaagag
ttttggaaagagtttgaagtaactcttgaaaaagccaaagaagaaatgaagaaccttaag
aagcaattgatcccaacaggtataaattgtttgaagtgtgaggacggagagtaccatatt
aaatgggggagaaatggacagttctttgcttgttcaaattatccagactgtaactcgaca
caggacttcaaaaagcacttagatggaagctatgaaatattacctaagaattggttccat
gataattgtccaaattgccaaaagagattagaagttaaaaaaggtaagtatggtaggttc
gtacgttgtgaagattaccctcaatgtgacacaacattaccttatacattagatattact
tgtcctgaatgtaatgttggaaagtttgctgagaagaagagtcgctacgggaaaattttc
tatggttgctctaattatccaaattgtgaaaatgcttcttggactaaaccatatgttcaa
gactgtccttcttgtggttacggaattatgggattcaaagaaactaagagagacggaaag
catttagaatgtgccaagtgtaaattcaaattagagtgggaacaaactaagtacggcaaa
gaagagttagagaagcagagacaagaagaggaagctctaaagggtagccattaa
DBGET
integrated database retrieval system
