Halobacteriovorax marinus: BMS_2963
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Entry
BMS_2963 CDS
T01659
Name
(GenBank) putative 23S rRNA (uracil-5-)-methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
bmx
Halobacteriovorax marinus
Brite
KEGG Orthology (KO) [BR:
bmx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bmx03009
]
BMS_2963
Enzymes [BR:
bmx01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
BMS_2963
Ribosome biogenesis [BR:
bmx03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
BMS_2963
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
DUF8617
Beta-barrel_RND_rel
Motif
Other DBs
NCBI-ProteinID:
CBW27730
UniProt:
E1WYU0
LinkDB
All DBs
Position
2966176..2967306
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AA seq
376 aa
AA seq
DB search
MDIMKKIEFTIDHIDPLGQGISKTQDQVCFIEKSLPGESGEIEIIKSKKKGRLIFSRLNS
ADLHSPSPLRIQPECEHFWHCSGCHYLHVKYEDELELKTSVIQRMFQYLDQYDQDIPLIS
ASKRFHYRNRIQLHYDKKLSKLGFIDSLRNEIREVANCLVANDEISASLKELYTANNWKN
LVRDEKNTGHIELYKLGDKVQISINKRYSEGGFTQVNEEMNQKMLSHLEEQVRQYIPAGI
TLLDLFGGAGNLSYNLEEYETYVVDGFPPTEMNYRPHQSFEQINLYKEGAIDKLQSRCSG
KDIAIILDPPRSGLKNINELIQKLKPSFIFMINCEPSSAIRDIKSIEGDFSIENLTTFDL
FPGTRHFETFSTLRFG
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
ttggatattatgaagaaaatagaattcactattgatcacattgaccctcttggtcaagga
atcagtaaaactcaggatcaagtatgttttattgagaagtcattaccaggagaatctgga
gagatagagatcattaaatcgaagaagaaaggcagacttattttctcaagattaaatagt
gcagaccttcatagcccttcaccactaaggattcagccagaatgtgaacacttttggcat
tgctcaggttgtcactacctccatgtaaaatacgaagatgagctagaattaaaaacttct
gtaattcaaaggatgttccaatatcttgaccaatatgatcaagatatcccacttatttct
gccagcaaaagatttcactatcgcaataggattcaacttcactatgacaagaagttatca
aaactaggatttattgactctcttagaaatgaaataagagaggttgcaaattgtttagtt
gcaaatgatgagatatcggcctcgcttaaagagctctacactgcaaataactggaagaat
ctagtgagagacgagaaaaatactggtcatatagagctctacaagcttggggataaggtt
caaatctcaatcaataaaagatactcagagggaggatttacacaagtcaatgaggagatg
aatcaaaagatgctctctcaccttgaagaacaagtgcgccaatatattcctgccggaata
acacttcttgacctctttggtggtgcaggtaacctaagttacaacctagaagaatacgaa
acttacgttgtagacggctttccgccaactgagatgaattatcgacctcaccaaagtttt
gagcagatcaatctgtacaaggaaggagcaatagataaattacaatctagatgctcagga
aaagatattgccattattttagatccgcctagatctggcctcaaaaatatcaacgaactc
atacaaaaattaaaaccttcttttatttttatgatcaattgcgagccctcatccgctatc
agagatataaaatccattgaaggagatttttcaattgagaatcttacaacctttgattta
tttccaggtacaagacactttgagaccttttctacattgcgatttggttga
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