Halobacteriovorax marinus: BMS_3274
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Entry
BMS_3274 CDS
T01659
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase alpha chain
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
bmx
Halobacteriovorax marinus
Pathway
bmx03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bmx00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BMS_3274 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bmx03021
]
BMS_3274 (rpoA)
03400 DNA repair and recombination proteins [BR:
bmx03400
]
BMS_3274 (rpoA)
Enzymes [BR:
bmx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BMS_3274 (rpoA)
Transcription machinery [BR:
bmx03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BMS_3274 (rpoA)
DNA repair and recombination proteins [BR:
bmx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BMS_3274 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
CBW28022
UniProt:
E1X0J6
LinkDB
All DBs
Position
complement(3275267..3276280)
Genome browser
AA seq
337 aa
AA seq
DB search
MDNFVAKNWTNMIRPVSLEADNESMKANYGKFVAKPLERGYGQTLGNSLRRALLSSLQGA
GIVAIRIEGVEHEFGTINNVKEEVSEIILNLKEVFFKLKGKEDTVLTLEKSGEGPVTAGD
ISESASLEVLNPEHVICNISSGGSIKVELKVARGKGYVTASENKEEYDLPVGWIYVDTLF
SPVHRVNFTVTNSRVGKRTDFDKLTLEVWTNAGIQPQDAVAFSAKILRDQLAVFLNFEDE
EEVVRLEKAPAQASSPANSALLKPVSELELSVRSANCLQNANIKYIYELVSKTEGEMLRT
KNFGRKSLNEIKEILSNMGLGLGMKVDSIMKDLQDGE
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
gtggataattttgtagcaaaaaattggacgaatatgatcagacctgtttctcttgaagca
gataatgagagtatgaaagcgaactatggaaagtttgtagccaagcctttagagagaggt
tatggacaaactttaggtaactctcttagaagagcactactttcttcacttcaaggtgca
ggaattgttgctatcagaattgagggtgtagagcacgagttcggtacaatcaataacgta
aaagaagaagtttctgaaattatccttaacttaaaagaagtattttttaagttaaaaggt
aaagaagatactgtacttactcttgagaagagcggagaaggtcctgtaacagctggagat
atttcagagagtgcaagccttgaggttctaaatccagagcacgttatatgtaatatttcc
tcaggtggttcaattaaggttgaacttaaggtagcaagaggaaaaggttatgttacagca
tcagaaaataaagaagaatatgatcttcctgtaggatggatctatgttgatactcttttc
tcacctgtacacagagttaactttacagttacaaactcacgtgttggtaagagaacagat
tttgataagcttactttagaagtatggacaaatgctggaattcaaccacaagacgcagtt
gctttctctgcaaagatcctaagagatcaacttgcagtattcttaaacttcgaagatgaa
gaagaagttgtaagattagaaaaagcaccagcgcaagcttctagccctgctaacagcgct
cttttaaagcctgtttcagaattagagctttctgtacgttctgctaactgtttacagaat
gctaacatcaagtacatctatgagttagtttctaagacagaaggtgaaatgttaagaact
aagaattttggtcgtaaatcgttaaatgaaattaaggaaattctcagtaacatgggactt
ggacttggaatgaaggtagattcaattatgaaagaccttcaggacggtgaataa
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