Brugia malayi (filaria): BM_BM13684
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Entry
BM_BM13684 CDS
T01050
Symbol
Bma-rpc-1
Name
(RefSeq) RNA polymerase Rpb1, domain 1 family protein
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
bmy
Brugia malayi (filaria)
Pathway
bmy03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bmy00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BM_BM13684 (Bma-rpc-1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bmy03021
]
BM_BM13684 (Bma-rpc-1)
Enzymes [BR:
bmy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BM_BM13684 (Bma-rpc-1)
Transcription machinery [BR:
bmy03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
BM_BM13684 (Bma-rpc-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Transpos_assoc
DUF6825
Motif
Other DBs
NCBI-GeneID:
6100496
NCBI-ProteinID:
XP_001897051
UniProt:
A0A0K0IYK3
LinkDB
All DBs
Position
Unknown
AA seq
1404 aa
AA seq
DB search
MGKEQYRESDLARKVSHVQFTAGNAESMRQVAHIPIFNSKLYDENPGRWIPVAHGPLDPR
LGTCQKHTDCQTCKQNLVDCVGHFGYIDLAIPVFHVGFFRLTIQMLQCICKFCSAMLITG
EQKKAFLHQVNNPNLDYLRRKALHKRIVAASKKITVCNRCGHKNGIVKKAVGAVLKIAHA
EVIPADNYSEYVYAAQENKELQNLLPKTKFTLLDPLQVQILFNKIEKEDIPLLMVRSADT
PKHPSDVILTRIPVPPCCIRPSVVSEVKSGTTEDDITMKLSEIMLINDVIEKHKKEGSPT
KTISETWDHLQVQCALYINSELSGLPPDMQPKRTTRGFTQRLKGKQGRFRGNLSGKRVDF
SGRTVISPDPNLRIDQVGVPVYVAKILTFPEIVNKANIERMRKLILNGDDIHPGANHIVE
RATGNKRFLKYGNREITAAQLKVGDIIERHLDDNDVVLFNRQPSLHKISIMSHRAKIVPG
RTFRFNECACTPYNADFDGDEMNLHVPQTYEARAEASLLMGVKSNLITPRSGEPLIAAIQ
DFITGTYLLTHKDSFFPRLEVHRFAAAIIDSSSKKQQRIRIPPPAILKPVELWTGKQLVE
LIIRPDVDSKISLNLTTKNKSYTGNEEFCVKDSYVIIRNSVLLCGVLDKALLGSGSKTNI
FYILLRDFGEDAAVDAMWRLGRMAPVFLSNRGFSIGIGDVRPSKTLLKEKSDLLSNGYKI
CDDYIESLKEGRLKAQPGCTEYETLEALILKELSAIRDHAGQACLRNLSRHNAPLTMAVC
GSKGSFINISQMIACVGQQAISGHRPPDGFEDRSLPHFERRQKTPAAKGFVENSFYSGLT
PTEFFFHTMGGREGLVDTAVKTAETGYMQRRLVKCLEDLCVNYDGTVRSSVGDVIEFTFG
EDGLDPALMEAKDGGVVDFKHILEHTRNTLPHLIEDANTTINELQKVVADTISEIIGKRH
AMFREQLESFINEYLKRTNKYYKLPKNCTKHMDNWMPSATHCNDCKNQKFFRETEIRSHC
LSRAQAVAFIKLCLRKFRRAICEPGTAVGAVAATSIGEPSTQMTLKTFHFAGVASMNITQ
GVPRIKEIINGVKLISTPLITAALTNEKDEKLARRVKARIEKTTLGEICDYIEEVYLPDD
CFILLKINAKRVRLLQLEITMSSIAQSICTSKLPVPVKISQITILGKTIMTIRPPELAKC
SKMMAIQYLKYNIGNVVVKGLPGIVRCVIHADEKKGDSYKLLVEGIDYREVMATLGVDGR
RTYFNNALTVADVLGIEAARSSIISEILSTMASHGIGLDQRHVMLLADLMTYRGEVLGIT
RNGLVKMKESVLLLASFEKTADHLFEAAFFSQEDKICGVSECIILGTPITIGTGLFKLLY
DHGKQLTISKMSTIFESPEFNLKL
NT seq
4215 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaagaacaatatcgtgaatcagatttggcacgcaaagtaagccatgtacagttt
acggctggtaatgcagaatcaatgaggcaggtggcacatatcccgatcttcaatagtaaa
ttgtatgatgaaaatcccggtcgatggattccggttgctcatggaccacttgatccacga
ttagggacatgtcaaaaacatactgactgccaaacttgtaaacaaaatttggttgattgc
gttggtcattttggttatattgatcttgcaatacccgttttccatgttggcttctttcgc
ttgacaatacagatgttgcagtgcatctgtaaattctgttctgcaatgttgattactggc
gagcaaaaaaaagcatttttgcatcaggttaataatccaaatttggattatttacgacga
aaagcgcttcataagcgtatcgttgcagccagcaaaaaaattactgtttgtaatagatgt
ggacataaaaacggtattgtgaagaaggcagttggtgcagtattaaaaatagcgcatgca
gaagtaattcctgctgataattattccgaatacgtttatgctgctcaggaaaataaagaa
ttacaaaatttattaccgaaaacgaaattcactttattagatccactccaagtgcagatt
ttatttaataagattgaaaaagaggatataccactattgatggtgcgctcggcagatacg
ccaaaacatccatcagatgttatcttgactagaatacctgttccaccgtgctgtattcga
ccttctgttgtgtctgaggtgaaatcgggaacaaccgaagatgatattacaatgaaattg
tctgaaattatgctgataaatgatgttatcgaaaaacacaaaaaggaaggttctccgacc
aaaactatttctgaaacgtgggatcatttgcaggttcaatgtgccttgtatataaacagt
gaactaagtggattaccacctgatatgcaacctaaaagaacaacacgtggatttacacag
cgattaaaaggaaaacaaggcagattcagaggaaacctttctggaaagcgtgttgatttc
tctgggagaacggttatatcaccggacccaaatcttaggattgatcaagttggtgtacct
gtttatgtagcgaagatcctcacttttccagaaattgtaaataaagcaaatattgaacga
atgcgtaaactgattctgaatggtgatgacatacatccaggagcaaatcatattgtggaa
agagcaacaggcaataaacgcttccttaagtatggtaatcgtgaaatcacagctgcacaa
ttaaaagttggtgacataattgaacggcatctggatgataatgatgttgtgcttttcaat
aggcaaccttcactgcataaaatctctatcatgtctcacagagcaaaaatcgttcctgga
agaacattcaggtttaatgaatgtgcatgcacaccatacaatgccgattttgatggtgat
gagatgaatttacatgttcctcaaacatatgaagcacgtgctgaagcatctctgttaatg
ggcgtcaaaagcaacttaattacgcctagatccggtgaaccactcattgctgctatacag
gatttcattactggcacttatcttctaacacacaaggatagctttttccctcgtttggag
gtgcatcgttttgcagcagcaatcatagactcaagttcgaaaaagcagcaaaggattcga
ataccaccaccagcaattctaaaaccagtggaactttggactggaaaacaactggtagaa
ttaattataaggccagatgtggattcgaaaatcagtttgaatttaactacaaagaataaa
agttataccggcaacgaagaattttgcgtcaaggactcctacgtaataatccggaatagt
gtcttgctgtgtggagtattggataaggcattattaggatcaggtagtaaaacgaacata
ttttacatacttctgcgtgattttggtgaggatgcagcggttgatgcgatgtggcgattg
ggcagaatggctcctgtgttcctcagcaatcgtggtttctctattgggataggcgatgta
agaccaagtaagacgttgttgaaagaaaaaagtgatttattgagtaatggttataaaata
tgcgatgattatattgaaagcttaaaagaaggacgattgaaagcacagccaggttgtacg
gaatatgaaacactggaggcattaattttgaaggaactttctgccattcgtgatcacgcg
ggtcaagcatgtttgcgcaatttgtcgagacacaatgccccactaactatggctgtttgt
ggttcgaagggttcatttattaatatttcacagatgattgcatgcgtgggtcagcaagct
atctctggacatagaccaccagatggttttgaggatcgttccttgccacatttcgaaaga
cgtcaaaaaacaccagctgcgaaaggttttgtagaaaacagtttttattctggcttaaca
cctaccgaatttttctttcacactatgggtggtcgtgaaggtcttgtcgatactgcagta
aaaactgctgaaactggttacatgcaacgacgactggttaaatgtctcgaagacctgtgt
gtaaattatgatggtacagtacgttcttcggtaggcgatgtaattgaatttacgttcggc
gaagatggcttggatcctgctttaatggaagcaaaggatggtggcgtcgtagatttcaaa
catatattggagcatactcgaaatacattaccgcatttgatagaagatgctaataccacc
atcaatgaattacaaaaagttgtcgcagatacaatcagtgaaataattggaaaacgacac
gcaatgtttcgagaacagcttgagtcttttatcaatgaatacttgaaaagaacaaacaaa
tactacaaacttccaaaaaattgcaccaaacatatggacaactggatgccatcagcaaca
cattgtaatgattgcaagaatcaaaagttctttcgagagaccgaaattagatctcactgt
ttgtcacgtgcacaagcagttgccttcattaagctttgcttaagaaaatttaggcgtgct
atatgtgaaccaggcacagcagttggtgcagttgctgctactagtattggtgaaccgtca
acgcaaatgacgctaaaaacatttcacttcgctggtgttgcttcgatgaatattactcag
ggtgtaccacgaattaaagaaatcattaatggtgttaagttgatttcaacaccattaatc
acagctgcactgacgaatgaaaaggatgaaaagttagcgcgacgagtgaaagcaagaatt
gagaaaacgacacttggtgagatctgtgattacatcgaagaagtttatttgccagatgat
tgctttattctgttaaagatcaatgcaaaacgtgtccgacttcttcaacttgaaatcaca
atgtcatcaattgcacaatctatttgcacttcaaaattacctgttccagtaaaaatatcg
cagatcacaattttgggtaagacaattatgacaattcgaccgccggaattggctaaatgc
tccaaaatgatggctatccaatatctgaagtataatattggaaatgttgttgtaaaaggt
cttccgggcattgtacgctgcgtgattcatgcagatgaaaagaagggcgattcttataag
ttactagtggaagggatagattatcgtgaagttatggcaacacttggtgtcgatggccgt
cgaacatatttcaataatgcactcaccgtcgctgatgtacttggcattgaagcagcacgt
tcatcgatcatttcggaaatattatccacaatggcttcgcatggaattggcttggatcaa
cgacatgtgatgttacttgctgatttaatgacttacaggggtgaagtgcttggtataacg
cgaaacggcttggtgaaaatgaaagaatcagtgttattattagcatcatttgaaaaaacg
gctgatcatctcttcgaagcggcatttttctcacaggaagataagatttgcggtgtaagc
gaatgcatcattcttggtactccaatcacaattggtactggtttattcaaattactctat
gaccacggtaaacaattgacaatatctaaaatgagcaccatttttgagtcacctgaattt
aatttgaaattataa
DBGET
integrated database retrieval system
