Brugia malayi (filaria): BM_BM13697
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Entry
BM_BM13697 CDS
T01050
Symbol
Bm13697
Name
(RefSeq) ATP-dependent helicase DDX48, putative
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
bmy
Brugia malayi (filaria)
Pathway
bmy03013
Nucleocytoplasmic transport
bmy03015
mRNA surveillance pathway
bmy03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bmy00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
BM_BM13697 (Bm13697)
09122 Translation
03013 Nucleocytoplasmic transport
BM_BM13697 (Bm13697)
03015 mRNA surveillance pathway
BM_BM13697 (Bm13697)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bmy03019
]
BM_BM13697 (Bm13697)
03041 Spliceosome [BR:
bmy03041
]
BM_BM13697 (Bm13697)
03009 Ribosome biogenesis [BR:
bmy03009
]
BM_BM13697 (Bm13697)
03012 Translation factors [BR:
bmy03012
]
BM_BM13697 (Bm13697)
Enzymes [BR:
bmy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BM_BM13697 (Bm13697)
Messenger RNA biogenesis [BR:
bmy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
BM_BM13697 (Bm13697)
mRNA cycle factors
Stress granule specific factors
BM_BM13697 (Bm13697)
Spliceosome [BR:
bmy03041
]
Complex C
Other components
EJC/TREX
BM_BM13697 (Bm13697)
Ribosome biogenesis [BR:
bmy03009
]
Eukaryotic type
90S particles
Helicases
BM_BM13697 (Bm13697)
Translation factors [BR:
bmy03012
]
Eukaryotic type
Initiation factors
eIF-4
BM_BM13697 (Bm13697)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
AAA_30
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
6097818
NCBI-ProteinID:
XP_001894368
UniProt:
A0A0J9YG30
LinkDB
All DBs
Position
Unknown
AA seq
404 aa
AA seq
DB search
MSKRNRKQIEPTAEDLSNVEFETSEEVDVVHTFDSMGLGEELLRGIYSYGFEKPSAIQQR
AIKQIVKGRDVIAQAQSGTGKTATFSIAVLQSLDISLRETQALILSPTRELAVQIQKVVL
ALGDYLNVQCHACIGGTNVGEDIRKLDYGQHVVSGTPGRVFDMIRRRNLRTRSIKMLVLD
EADEMLNKGFKEQLYDIYRYLPPGAQVVLLSATLPHEILEMTSKFMTDPIRILVKRDELT
LEGIKQFFVAVDREEWKFDTLCDLYDTLTITQAVIFCNTRRKVDWLAEKLKEANFTVSSM
HGEMEQKERDAIMKEFRGGASRLLISTDVFARGLDIPQVSLVVNYDLPNNRELYIHRIGR
SGRFGRKGVAINFVKSDDIRILRDIEQYYATQIDEMPMNVADLI
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaagcgaaatcgaaaacagatcgagccaacggcggaagatctgtcaaacgttgag
tttgaaacatcggaagaggttgatgttgtgcatacttttgatagtatgggactgggcgaa
gaattattgcgtggaatctactcatatggatttgaaaagccgtctgcaattcaacagcgt
gctatcaaacaaattgtcaagggtcgggatgttatcgcacaagcccaatctggtaccgga
aagacggcgacatttagtattgctgtattgcaatcgttggatatatcgctacgtgaaaca
caggcgcttatcttatcaccaactcgagaattagctgtgcaaatacaaaaggttgtactt
gctttgggtgattacttgaacgtgcagtgccatgcatgcataggaggtacaaatgttggt
gaagatattcgtaaacttgactatggtcaacatgtcgtttcgggaactcctggacgagtt
tttgatatgatcagacgccgcaatttgcgtactcgaagcataaaaatgttggtactcgat
gaagccgatgaaatgcttaacaaaggattcaaggagcaactttatgatatctatcgttat
cttccacctggtgcacaagttgtacttctttcagcaacccttcctcatgaaattcttgag
atgacaagcaaatttatgactgatcctattcgtatcctcgtaaaacgtgatgaattgaca
ctagaaggcatcaagcagttctttgtagcagttgatcgagaagaatggaaattcgataca
ttgtgtgatttatacgatactcttacaatcacacaggcagtaattttttgcaacactcga
agaaaggttgattggttggctgagaaattaaaagaggcaaatttcacagtgtcatctatg
catggagaaatggaacaaaaggagcgtgacgcaattatgaaggaattccgtgggggcgcc
agtcgtttattgatttcaacggatgtatttgcgcgtggattggatataccacaagtgtca
cttgttgtcaattatgacttgccaaacaatcgtgaattgtatatccatcgaattggacga
tctggtcgtttcggtcgtaagggtgttgccattaatttcgtgaaatctgatgacatccgt
attttgcgtgatattgaacaatattatgccactcaaattgatgaaatgccaatgaatgtg
gcagatctcatctga
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integrated database retrieval system
