Brugia malayi (filaria): BM_BM13698
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Entry
BM_BM13698 CDS
T01050
Symbol
Bma-hel-1
Name
(RefSeq) putative ATP-dependent RNA helicase p47 homolog, putative
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
bmy
Brugia malayi (filaria)
Pathway
bmy03013
Nucleocytoplasmic transport
bmy03015
mRNA surveillance pathway
bmy03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bmy00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
BM_BM13698 (Bma-hel-1)
09122 Translation
03013 Nucleocytoplasmic transport
BM_BM13698 (Bma-hel-1)
03015 mRNA surveillance pathway
BM_BM13698 (Bma-hel-1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bmy03019
]
BM_BM13698 (Bma-hel-1)
03041 Spliceosome [BR:
bmy03041
]
BM_BM13698 (Bma-hel-1)
Enzymes [BR:
bmy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BM_BM13698 (Bma-hel-1)
Messenger RNA biogenesis [BR:
bmy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
BM_BM13698 (Bma-hel-1)
Spliceosome [BR:
bmy03041
]
Complex C
Other components
EJC/TREX
BM_BM13698 (Bma-hel-1)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
BM_BM13698 (Bma-hel-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
AAA_19
DUF5416
Motif
Other DBs
NCBI-GeneID:
6096568
NCBI-ProteinID:
XP_042930922
LinkDB
All DBs
Position
Unknown
AA seq
426 aa
AA seq
DB search
MDEDQLLDYEEEQEETTDGNKTENGSATDKKIKGTYASIHSSGFRDFLLKPELLRAIVDC
GFEHPSEVQHECIPQAILGMDIVCQAKSGMGKTAVFVLATLQQLEPVDGEVSVLVMCHTR
ELAFQISKEYERFSKYIPGVRIAVFFGGIPIKKDEETLKNNTPHIVVGTPGRTLQLARQG
SLKLKNIKYFVLDECDKMIGDNDMRRDVQEIVKMTPQEKQVMMFSATLPRDLRVVCKKFM
QDPMEVYVDDEAKLTLHGLQQHYVKLKETEKNKKLLELLDQLEFNQVVIFVRSVQRCGAL
HTLLSEQNFPSIAIHRGMPQEERLSRYQQFKDFQKRILVATNLFGRGMDIERVNIVFNYD
MPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFDVNVTELPAEIEVATY
IEGRAN
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atggacgaagatcagttgttggactatgaggaagagcaagaagaaacgactgatggcaac
aaaacagaaaatggatcagcaacagataagaaaattaagggcacttatgcttccattcac
agtagtggttttcgagattttctcttgaaaccggagctgctgcgggcaattgtggattgc
ggttttgaacatccttcagaagtgcaacatgaatgcattccgcaagctattttgggcatg
gatattgtttgtcaagcaaaatcgggaatgggcaaaacagctgtatttgttctggcaact
ttgcagcaacttgaacctgtcgacggcgaggtgtcggttttggtaatgtgtcatacccgc
gagttggcattccagatttcaaaggaatatgaacggttcagtaaatacattcctggtgtt
cgtattgctgtcttctttggtggcataccaatcaaaaaggatgaagagacacttaaaaac
aatacaccacacatcgttgttggaactcctggccgtacgctccaactagctcgacaagga
agcttgaaattgaagaacatcaaatatttcgttttggatgaatgcgacaaaatgattggt
gataatgatatgagacgagacgttcaagaaattgtgaaaatgacgccgcaagagaaacaa
gtgatgatgttcagtgctacgttaccaagggatttacgagtggtctgcaagaaattcatg
caagatccaatggaagtgtatgtcgatgatgaagcaaagttaacactgcatggattgcaa
cagcattacgtgaaactgaaggaaactgaaaagaataagaaattgcttgaattacttgat
caactggaattcaatcaagttgtgatttttgtgcgatctgtgcaacgctgtggcgctttg
catactttgctctctgaacagaattttccaagcattgcaattcatcgtggtatgccacaa
gaggagcgcctttctcgatatcagcaattcaaggatttccagaagcgtattcttgttgcg
acgaatctttttggtcgtggtatggatattgaacgcgtgaacattgtgttcaattatgat
atgccggaagattcagatacgtatttgcatagagtagcacgtgctggacgtttcggtacc
aaaggtttggcgataacatttgtctccgatgaaaatgatgcgaaaattctgaatgatgta
caggacaggtttgatgtgaatgttactgagttaccggctgaaatcgaagttgcaacatac
attgagggacgagctaattga
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