Brugia malayi (filaria): BM_BM13791
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Entry
BM_BM13791 CDS
T01050
Symbol
Bma-mtr-4
Name
(RefSeq) Uncharacterized protein
KO
K12598
ATP-dependent RNA helicase DOB1 [EC:
5.6.2.6
]
Organism
bmy
Brugia malayi (filaria)
Pathway
bmy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bmy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BM_BM13791 (Bma-mtr-4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bmy03019
]
BM_BM13791 (Bma-mtr-4)
03041 Spliceosome [BR:
bmy03041
]
BM_BM13791 (Bma-mtr-4)
03009 Ribosome biogenesis [BR:
bmy03009
]
BM_BM13791 (Bma-mtr-4)
03016 Transfer RNA biogenesis [BR:
bmy03016
]
BM_BM13791 (Bma-mtr-4)
Enzymes [BR:
bmy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
BM_BM13791 (Bma-mtr-4)
Messenger RNA biogenesis [BR:
bmy03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
BM_BM13791 (Bma-mtr-4)
Spliceosome [BR:
bmy03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
BM_BM13791 (Bma-mtr-4)
Complex C
U4/U6.U5 tri-SnRNP related factors
BM_BM13791 (Bma-mtr-4)
Ribosome biogenesis [BR:
bmy03009
]
Eukaryotic type
Pre-60S particles
Helicases
BM_BM13791 (Bma-mtr-4)
Transfer RNA biogenesis [BR:
bmy03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
BM_BM13791 (Bma-mtr-4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
MTR4_beta-barrel
DEAD
MTR4-like_stalk
DEXQc_Suv3
ResIII
Helicase_C
nSTAND3
Motif
Other DBs
NCBI-GeneID:
6103345
NCBI-ProteinID:
XP_001899924
LinkDB
All DBs
Position
Unknown
AA seq
1052 aa
AA seq
DB search
MDEDMEMFNVFAEGSSSSSSTSRKEVSNRSVQKTETSKKKQKEARERANQLLGQLAAGNA
ANKDIKVVTSDDDGYGDDNADDNDTGLLPKRSKNETMEELPGLASHPRNNIKTVESEGNC
SHEIVLPPNMEYVPLKPRTTAPAKMYEFQLDAFQREAITCIDNSHSVLVSAHTSAGKTVV
ALYAIAMSLRDKQRVIYTSPIKALSNQKYRELEEEFGDVGLMTGDNTLNPDASCIVMTTE
ILRSMLYRGSEIMREVGWVIFDEIHYMRDKERGVVWEETIILLPDTVHYVFLSATIPNAR
QFADWVVYLHDQPVHVIYTDYRPVPLQHFIYPAGGSGLYEVVNMQGIFREDKFTEAMNVL
SQVGDAGQGGINRGKKGGTSGTPHVVNIIRTLKERDMIPVIIFSFSRKECEAYATQMTSL
DFNTEDEKAKVKEIFVNAISLLSDEDSKLPEIGRVLPLLLRGIGVHHSGLLPIVKEVIEI
LFGEGLIKTLFATETFAMGLNMPARTVLFTSARKFDGKDYRWITSGEYIQMSGRAGRRGK
DDRGLVILMVDQQMGQDVAKQIIKGAPDPLNSQFRLTYNMVLNLLRVEGINPEFMLENSF
YQFQNYDALPQLYGNVERKKEELSAYKIDKETEISGYYQMEKQINVLKEAVKEVVTKPKY
LVPFLQAGRLLHIVSNGKDFGWAALLDFHKKANPVDPLGLDVMYVLDVLILLSTESAKNL
SDITQLRPPNANEKGVVEVVSVAISCVSEISAARVKLPQNLKAYEGKQSAGRVIKEVLKR
FNGIMPLLDPLNDMKINDSVLQENIIKLQALEKRKDSHPLKENSKFDEIYKQYEKKLELE
AELKVAKTELKKAQSLLQLDELKCRKRVLRRLQYCDENDVITQKGRVSCEVSAADELMLT
EMMFGGIFTELATPQLAALLSCFVFEEKAGGTKLADDLSGCLRAMQEYARRIARVTKESK
LEIDEDKYVESFKPHLMDVVHAWCTGASFAEILKKTDVFEGSIIRCMRRLEELLREMVGA
SKAIGNGDLEARFEQARVLLKRDIVFTASLYL
NT seq
3159 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagatatggaaatgttcaatgtttttgcggaaggtagtagttcatccagtagt
acgagtaggaaggaagtgtcgaataggtccgtccagaagacagagacgagtaagaaaaag
caaaaggaagctcgtgaacgagccaaccaattgctgggacaattagcggcaggcaatgct
gcaaataaagatattaaagtggtaacaagtgatgacgatggttatggcgatgataatgca
gatgacaacgacacaggattattaccgaaaaggtcgaaaaatgagactatggaggagctt
cctggtttagcttcccatccacgaaacaatatcaaaactgtcgaaagtgaaggaaattgt
tcacacgaaatcgtcttgccaccaaatatggaatatgtaccattgaagccacgtacaaca
gctccggccaagatgtatgaattccagttagatgcctttcaaagagaagcaatcacctgt
attgataatagtcattccgttcttgtatcagcccatacttctgctggaaaaactgttgtt
gcattatatgcgatagcgatgtctttacgtgataagcagcgcgttatatatacttcgcct
atcaaagccttatctaatcaaaaatatcgagaattggaagaggaatttggtgatgtaggt
ttgatgactggtgacaatacgttgaatccggatgcttcttgcattgtcatgacgacagaa
attctgcgatcaatgttataccgtggttcggagattatgagggaagttggctgggtaatt
ttcgatgaaattcactatatgcgcgataaagagcgtggcgttgtgtgggaagaaacaatt
attttactacctgacactgtacattatgtttttctttctgctacaattccaaatgcaagg
cagtttgcagattgggtagtttatcttcacgatcaaccggttcatgttatatataccgat
tatcgtccagtgcctttgcagcatttcatatacccagctggtggttcaggcctatatgaa
gttgtaaatatgcagggaatttttcgagaggataaatttactgaagcaatgaatgtgctg
tcacaagtgggagatgcaggacagggtggaatcaacagagggaagaaaggtggaacatca
ggtacacctcatgtggtgaatataatccgtacgcttaaggaacgagacatgattccagtc
atcattttctcattcagtcgaaaagagtgtgaagcatatgcaacacaaatgacgagtttg
gacttcaatacagaagatgaaaaagcaaaggtaaaagaaatatttgttaatgcaatcagt
ttgttatccgatgaagacagcaaattgcctgaaattggacgagtgctaccattgttgttg
cgtggtattggtgtgcatcattcgggtttattgccaattgttaaggaagtgatcgaaatt
ttattcggagagggtttaatcaaaactttgtttgccaccgaaacttttgctatgggtcta
aatatgcctgctcggacagtgctgttcacatcggcaagaaaattcgatggaaaagattat
cgttggattacatcaggtgaatatattcaaatgagtgggcgagctggacgtcgtggtaag
gacgaccgtggtcttgtaatattaatggttgatcagcaaatgggacaggatgtggcaaaa
caaattattaaaggtgcgccagatccacttaactcgcagtttcgcctgacttacaatatg
gttttgaacctccttcgagttgaagggataaatcctgaatttatgctagagaattcattt
tatcagttccagaattatgatgccttgccgcagctctatggaaacgtagaaaggaagaaa
gaagaactttctgcttataaaattgacaaagaaacggaaatatcaggttattatcaaatg
gaaaaacagattaatgtattgaaagaagctgtaaaagaagtggtcacgaaaccaaaatat
cttgtaccctttctgcaagctggacgtttgcttcatattgtttcaaacggcaaagatttt
gggtgggcagctctgttggacttccacaaaaaagcgaatccggttgatcctcttggcttg
gacgtgatgtatgtactagatgtattgatattgctgtctacagaaagtgcgaaaaattta
tcagatattacacagttgcggccgcctaatgcaaatgagaaaggggtggtagaggttgta
tctgttgctatcagttgcgtatctgaaataagtgcagcacgcgtaaaattgccacagaat
ctgaaagcatacgaggggaaacaaagtgctggtcgcgttataaaagaagttttgaaaagg
ttcaacggaataatgcctttgcttgacccgttaaacgacatgaaaataaatgattcagtg
ctacaagaaaatattattaaattgcaagcgctggaaaaacgaaaggatagtcatccttta
aaggaaaacagtaaatttgacgaaatctacaagcagtatgaaaagaaactagaattggaa
gcggaactgaaggtggcaaaaactgagctaaagaaagcgcaaagtttattgcagctagat
gagctgaaatgtcgcaagcgtgtgcttcgaaggttgcaatattgtgacgagaatgatgtg
attacacaaaaggggcgtgtatcgtgtgaagtaagtgctgcagatgagttgatgttaacg
gagatgatgtttggtggcatatttaccgaactcgctactccacaattagcagctttactc
tcatgttttgtatttgaagagaaagcaggaggaacaaaattagcagatgatcttagtgga
tgtttaagagcaatgcaagaatacgccagacgtattgcaagagtgacaaaggaatcaaaa
cttgagattgatgaagacaaatatgttgaatcgtttaagccgcatttaatggacgtagtc
catgcatggtgcactggtgcttctttcgctgaaattttaaaaaaaacagatgtttttgaa
ggttcaataattcgttgcatgcgacgtttggaagaattgctgcgtgagatggtgggtgct
tcaaaagcaattggaaatggagatctggaagcacgttttgaacaagcacgagtacttttg
aaacgtgatatcgttttcacggcatcgttatatttatag
DBGET
integrated database retrieval system
