KEGG   Brugia malayi (filaria): BM_BM13935
Entry
BM_BM13935        CDS       T01050                                 
Symbol
Bma-syf-1
Name
(RefSeq) Uncharacterized protein
  KO
K12867  pre-mRNA-splicing factor SYF1
Organism
bmy  Brugia malayi (filaria)
Pathway
bmy03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:bmy00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    BM_BM13935 (Bma-syf-1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bmy03019]
    BM_BM13935 (Bma-syf-1)
   03041 Spliceosome [BR:bmy03041]
    BM_BM13935 (Bma-syf-1)
Messenger RNA biogenesis [BR:bmy03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     BM_BM13935 (Bma-syf-1)
Spliceosome [BR:bmy03041]
 Complex B
  Other components
   Prp19-related factors
    BM_BM13935 (Bma-syf-1)
 Complex C
    BM_BM13935 (Bma-syf-1)
SSDB
Motif
Pfam: HAT_Syf1_CNRKL1_C HAT_Syf1_M HAT_Syf1_CNRKL1_N HAT_PRP39_N HAT_PRP39_C TPR_14 Suf Mad3_BUB1_I TPR_15 TPR_2 NRDE-2
Other DBs
NCBI-GeneID: 6101681
NCBI-ProteinID: XP_042931320
LinkDB
Position
Unknown
AA seq 864 aa
MTSQVLEASSSVYASAVERTKRVASEEEDVGFEEDILKNPFSLRSWLRYIEHKKKCKAPS
KQINLVYERALKELPGSYKLWYNYLRFRRKQVVDKCPVDPAYKYVNNAYERALVFMHKMP
RIWMEYCEFLTLQRLVTQTRRVFDRSLRALPVTQHDRIWPLYIKFVTSHEIPETTIRVYR
RYLKLLPKCREDFVDYLRNIDQLDDAAQQLAVLVNDDKPYSEHGKTTHQLWTDLCELISK
NPNKVHSLNGDAIIRQGIQRYSDQVGLLWCSLAEYYIRGGHFERARDVYEESLISVKTVR
DFTQVFDAYAKFAERATAAKMDEIDNEDTAADEEQQLELELLFARFEHLMDRRPLLLNSV
LLRQNPHNAYEWLNRVRLYEGNSMKQIETYEQGVRTVQPKLQTGKLSNIWISFAKFYEQK
DMLDEARLVFERGLRPEYTKVDDLASVWCEYVEFELRHRNPEYARKLMQRATAMPPRKTH
YFDETEPVQNRLYKSLKIWSLYADIEEAFGTLESCQAVYERIIDLRIATPQVVVNYAKFL
EENNYFENAFKAYEKGIALFKWPVVNEIWTVYLVKFLKRYGGKKLERARDLFEQCLENCP
SKFAMKLYLLYAKLEEEYGLPRHAMNIYNRATTAVEKHEMYSMFNIYIKKATSMYGLTFT
RPIFEHAVEVLPEDQSREMSIRFAQMERTLGEIDRARAIYAHCSEICDPRVHGMFWEIWK
EFEVKHGNEDTVREMLRIKRSVQATYNTNVNIMSAQMLSTAAGAGTGTIIHEPSTAGDSM
AMLEARAQKIAEEEAGVTKVAVGGTGIKFVRGAIRVVESNVTENPEEIDIEDDDGDDEQK
ILDDVETKAIPTGVLGSLAKENDQ
NT seq 2595 nt   +upstreamnt  +downstreamnt
atgacaagccaggttctagaagcatccagcagtgtttatgccagtgccgtagaaagaacc
aagagagttgcatcagaggaagaggatgtcgggttcgaggaagatatactcaaaaatcct
ttttcacttcggagttggttgagatatatcgaacataaaaagaaatgtaaagcgccgtca
aaacaaatcaacctggtttatgaacgtgctctaaaagaacttccgggcagctataaacta
tggtataattatcttcgatttcgtcggaaacaagtggtagataagtgtcctgtagatcca
gcatataagtacgttaacaatgcttatgaacgagcactggtcttcatgcataagatgcct
cgcatatggatggagtactgtgaattcttaacgttacaacgtcttgtgacgcaaactaga
cgagttttcgatcgctctctacgagcattgccagttactcaacatgatcgaatttggccg
ctctatatcaagtttgtaacaagccatgaaattccggaaacgacaattagagtctacagg
agatacttaaaattgttaccaaagtgtcgtgaagattttgttgattacttacggaatatt
gatcagttagatgacgccgctcaacaacttgccgttcttgtgaatgatgataagccatac
tccgaacatggcaaaacaactcatcaactatggactgatttgtgtgaattgatttcgaaa
aatccaaataaagtgcattcattgaatggtgatgcaatcatacgacagggcatacagaga
tatagcgaccaggtaggacttctatggtgctcgctagcggagtattatatcagaggcggg
cactttgaacgggcaagagatgtgtatgaagaatcactgatatcggtcaaaactgtacgg
gacttcacgcaggtatttgatgcttatgccaaatttgcggaacgtgcaacagcagcaaaa
atggatgaaatagataatgaggacactgcagctgatgaagaacaacaattagaattagag
cttcttttcgcaagatttgagcatttaatggaccgtcgaccacttcttttaaatagcgtt
ttgttgcgccaaaatcctcataatgcatatgaatggttaaatcgtgtccgattatatgaa
ggcaacagtatgaagcaaatcgagacctatgagcaaggtgtccgaacagtgcaaccaaaa
ctacaaactgggaagttgtcaaatatttggataagtttcgcgaaattttatgaacaaaag
gatatgttggatgaagctaggttagtatttgaaagaggactaagacctgaatataccaaa
gtagatgatcttgcatcggtatggtgtgagtatgttgaatttgagctgcgccatcggaat
cctgaatatgctagaaaactaatgcaaagagcaactgctatgccacctcgaaaaactcat
tactttgatgaaactgaaccagtccagaatcggctatacaaatcattaaagatttggtct
ttgtacgctgatatcgaagaagcatttggcactcttgaaagttgtcaggctgtttatgaa
aggattattgatttacgtattgctactccacaagtagtggttaattatgctaaatttttg
gaggaaaataattattttgagaatgctttcaaggcttatgagaaaggaatagcattgttt
aaatggccagttgtcaatgaaatttggaccgtatatttggttaaatttctgaagcgatat
ggtggcaagaaactggaacgtgcgcgcgacttgttcgagcagtgcttagaaaattgccct
tcaaaatttgcaatgaagctttatttattatatgcaaagttggaagaagaatatggtttg
ccacggcacgcaatgaacatttataatcgtgcgactactgcagttgaaaaacatgaaatg
tatagtatgttcaatatttacatcaaaaaagcgacaagcatgtacggtttaacattcaca
agaccaatatttgaacatgccgttgaagttcttccggaagatcagtccagggaaatgagt
attcgatttgcacaaatggaaagaacactgggtgagattgatcgagcacgagcaatatat
gctcactgttctgaaatatgtgaccctcgggttcatgggatgttctgggaaatttggaag
gaatttgaagtgaagcatggtaatgaggatacggtaagggagatgttgcgtataaaaaga
tcggtgcaagcaacttacaacacaaacgttaatatcatgagtgcacagatgttatccaca
gcagcgggtgcaggaactggtacaatcatccatgaaccaagcacggctggtgatagcatg
gcaatgcttgaagctcgtgctcagaagatcgccgaagaagaggcaggtgtaacgaaggta
gcagttggcggcacaggtataaaatttgtacgaggagctatccgtgtggtcgaatcaaac
gttactgaaaatccagaagaaattgatattgaagatgatgacggcgatgatgaacaaaaa
attttagacgatgtggaaacgaaagctatacccacaggtgttttgggttcacttgcaaaa
gaaaatgatcaatga

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