Brugia malayi (filaria): BM_BM13976
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Entry
BM_BM13976 CDS
T01050
Symbol
Bma-clpf-1
Name
(RefSeq) Pre-mRNA cleavage complex II protein Clp1, putative
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
bmy
Brugia malayi (filaria)
Pathway
bmy03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bmy00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
BM_BM13976 (Bma-clpf-1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bmy03019
]
BM_BM13976 (Bma-clpf-1)
Enzymes [BR:
bmy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
BM_BM13976 (Bma-clpf-1)
Messenger RNA biogenesis [BR:
bmy03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
BM_BM13976 (Bma-clpf-1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLP1_P
Clp1
CLP1_N
TniB
nSTAND3
CbiA
MMR_HSR1
ATP_bind_1
SRP54
AAA_16
AAA_22
AAA_24
AAA_18
AAA
Motif
Other DBs
NCBI-GeneID:
6099098
NCBI-ProteinID:
XP_001895648
UniProt:
A8PB32
A0A1D5BKM5
LinkDB
All DBs
Position
Unknown
AA seq
433 aa
AA seq
DB search
MESGKSPLEENLQEFTLKEDSELRFEVANGDVMLELVDGRAEVFGTELIQHKKYVFPAGS
RVAVFTWKKAVVELVGKTESAYVAEQTPMIIYLNTHAALEQLREHAESVVMQQEQARGPS
LMIVGPTDVGKTTVCRILCNYAVRVGRTPIFVDLDVGQGSISVPGTVGALYIEKTADVVE
GFDKKAPLVYHFGNLSPGSNIPLYDLLVKQLAEAISKRRKSSQDATYGGVIINTCGWVKG
EGYACLVNAAEEFEVDVVIVLDHERLYNELQRDLPSFVKILHQPKSGGVENRSKEVRISS
RNAFVHKYFYGTRAMPLYPHTFELSFDEVQFCKIGCERLPIECLPFGMKVDDHRTKVVPI
EPSEDLVHHLVSLSMCTAVDQSVLTTNVMGFIVITAVDMEREKLTVLSPQPYPLPSKILI
LSEVTFIDDKERT
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atggagtcaggaaaatcacctctggaagagaatcttcaagagttcactctgaaagaggat
agcgaactgcgttttgaggtcgcaaatggtgatgtgatgctagagcttgtggatgggcga
gccgaagtttttgggaccgaactcatccagcacaagaaatatgtcttcccagctggatcg
agagtagctgtatttacatggaaaaaggctgttgtggaattggttgggaaaacagaaagt
gcgtatgttgccgaacaaactccaatgatcatttatttgaatacgcatgcagctttggaa
caactacgtgagcatgctgaatcagtagttatgcaacaagagcaagctcgtgggccatcg
ttaatgatagtgggtccaacagatgtgggtaaaacaacggtctgtcgtattctgtgtaat
tatgcagtccgagtgggcagaacaccaatattcgtcgatttggatgttggacagggaagt
atttctgttcccggaactgttggagcactctatattgagaaaacagccgatgttgttgaa
ggtttcgataaaaaagcacctttagtttatcattttggaaatctttcacccggttctaac
attccgctgtatgatttattggtgaagcaacttgcggaggcaatatcaaaaagacgaaaa
tctagccaggatgctacttatggaggagtaataattaatacatgtggttgggttaaagga
gaagggtatgcatgtttagtaaatgcagcagaagaatttgaagttgatgttgtgattgta
ttagatcacgagcgattatacaatgaactgcagcgagacttgccatcttttgttaagatt
ttacatcaaccgaagtctggtggtgttgagaatcgttcaaaagaagttagaatatcgagc
cgcaatgcttttgtacataagtatttttatggtacacgcgcaatgccactttatccacat
acattcgagttatcatttgatgaagttcaattctgcaaaattggctgcgaacgattgcct
atcgaatgtttgccgtttgggatgaaagttgatgatcacaggacaaaagtagtaccaata
gaaccatcggaagatttggtacatcatcttgtgtcgctttcaatgtgtacagctgtcgat
cagtcagtgctaacaacgaacgtgatgggtttcattgtgattacggccgtcgatatggaa
cgagaaaagctgacagtactaagcccacaaccttatccgttgccatccaagattcttatt
cttagtgaagttacatttattgatgataaggagcggacttaa
DBGET
integrated database retrieval system
