KEGG   Brugia malayi (filaria): BM_BM14030
Entry
BM_BM14030        CDS       T01050                                 
Symbol
Bma-rpb-5
Name
(RefSeq) Uncharacterized protein
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
bmy  Brugia malayi (filaria)
Pathway
bmy03020  RNA polymerase
bmy03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:bmy00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    BM_BM14030 (Bma-rpb-5)
  09124 Replication and repair
   03420 Nucleotide excision repair
    BM_BM14030 (Bma-rpb-5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bmy03021]
    BM_BM14030 (Bma-rpb-5)
   03400 DNA repair and recombination proteins [BR:bmy03400]
    BM_BM14030 (Bma-rpb-5)
Transcription machinery [BR:bmy03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     BM_BM14030 (Bma-rpb-5)
  RNA polymerase III system
   RNA polymerase III
     BM_BM14030 (Bma-rpb-5)
  RNA polymerase I system
   RNA polymerase I
     BM_BM14030 (Bma-rpb-5)
DNA repair and recombination proteins [BR:bmy03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      BM_BM14030 (Bma-rpb-5)
SSDB
Motif
Pfam: RNA_pol_Rpb5_C RNA_pol_Rpb5_N NA-iREase1 DUF4817 Mrr_cat
Other DBs
NCBI-GeneID: 66057956
NCBI-ProteinID: XP_042934042
LinkDB
Position
Unknown
AA seq 211 aa
MADDELETYKLWRVRKTVMQMCHDRGYLVTQEELDQTLENFKETFGDKPSERHPSRNELT
VLVAHNDDPTDQMFVFFPEDSKIGIKTIKAICQQMQEQAITRAIIVVQTGMTPSAKQAIA
DMAPKYTLEQFLEAELMVNITEHELVPEHVVMTNEEKNELLGRYKLKDTQLPRIQQSDPV
ARYFGLRRGQVVKIIRPSETAGRYITYRLVV
NT seq 636 nt   +upstreamnt  +downstreamnt
atggcggacgacgaattggaaacttataagctgtggagagttcgaaagacagttatgcaa
atgtgccatgatcgcggatatttggtaacgcaagaagaattggatcaaacactggaaaat
ttcaaagaaacctttggtgataaaccaagtgaacgacatccatcccgtaatgaattaact
gttttggtagcacataacgatgatccaacagatcagatgttcgtctttttcccggaagat
tctaaaattgggatcaaaacaattaaggcgatctgtcaacaaatgcaggaacaggcaata
acacgtgcaattattgtcgtacaaactggtatgactccatcagctaagcaggcgatagcc
gatatggcaccaaaatacaccttggaacagttcctagaagctgagctcatggttaatata
actgaacacgaattggtaccggagcatgttgtcatgacaaacgaagaaaagaacgaatta
ctgggtcgatataagctcaaagatacacagttaccccgaattcagcagagtgatccggta
gctaggtatttcggtttacgacgaggacaagtagtcaaaattattcgaccatccgaaact
gctggaagatacattacttaccgacttgttgtgtaa

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