Brugia malayi (filaria): BM_BM1959
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Entry
BM_BM1959 CDS
T01050
Symbol
Bma-mog-4
Name
(RefSeq) pre-mRNA splicing factor ATP-dependent RNA helicase, putative
KO
K12813
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:
5.6.2.6
]
Organism
bmy
Brugia malayi (filaria)
Pathway
bmy03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bmy00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
BM_BM1959 (Bma-mog-4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bmy03041
]
BM_BM1959 (Bma-mog-4)
Enzymes [BR:
bmy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
BM_BM1959 (Bma-mog-4)
Spliceosome [BR:
bmy03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
BM_BM1959 (Bma-mog-4)
Complex C
U4/U6.U5 tri-SnRNP related factors
BM_BM1959 (Bma-mog-4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_N
Helicase_C
HA2_C
DEAD
AAA_22
AAA_19
Reprolysin
Flavi_DEAD
AAA_30
TRI4_N
nSTAND3
Motif
Other DBs
NCBI-GeneID:
6100638
NCBI-ProteinID:
XP_001897192
UniProt:
A0A0J9XQL0
LinkDB
All DBs
Position
Unknown
AA seq
1006 aa
AA seq
DB search
MADFLEQWVNDELYTLVGCSDRTAVQYILALARKSIDAEDLLGRLRSTDTMEDTPAVRKF
ISELIARVPHAAAKREKVIQPSAAELRAKEIMRLNRDLKTIESDDEDDVSTRKREKKKKR
KSIIPMKESASDEMDRINAEEEQDLRERDELAARIRQRDKEKTRNIVTKSEKKAEEEAAK
RLKLETKDRTKIVSQLREESRKQYLSKRKDDKLDELEKIVEDDEHFFANERLTEREKKDM
KYRRDILEYARQHERAADFLKIKRYHVPDAKVKSVPLDSLEDADEIPKGDGKRWEDDRLA
AAIAKYGAKDKKRDEFEMVLDDEKIDFIQAFQMPGTADTEEKMFSAAQKKKITLSETRKS
LPVYTYRDEFIQAVHDHQVLIIEGETGSGKTTQLPQYLYEAGFCVNKMKVGCTQPRRVAA
MSVATRVAEEMGVKLGIEVGYSIRFEDCTSERTVVKYMTDGMLLREFLNEPDLASYSVII
IDEAHERTLHTDVLFGLVKDIARFRKDLKLLVSSATLDVEKFSTFFDDAPILRIPGRRFP
VDIYYTKAPEADYLDAAMVSILQIHLTQPLPGDILVFLTGQDEIETLMESLLERTKYFGK
KIKELIVLPIYANLPSDLQAKIFEPTPPNARKVVLATNIAETSVTIDGICYVIDPGFSKQ
NSFDARSGVEHLHVVTISKAAANQRAGRAGRTGPGKCFRLYTAWAYKNELEDQPIPEIQR
TNLGNVVLMLKSLGIHDLVHFDYLDPPPQETLVIALEQLYALGALNHRGELTKLGRRMAE
FPCDPCMSKMIIASEKYGCSEEIITIAGMLSCNAAVFYRPKALVIHADAARKGFWVPGGD
HLTLLNVYNRWRDTNYSSQWCMENFVQYRTMKKARDVRDQLEGLLERVEIDQVSNNDSIA
IRKTITAGYFYNCAKLDSNGHYKTVKHKHTVHIHPNSSLFEETPRWMIYFELVFTSKEFM
REVIEIESSWLTEVAPHYYRAKELEDSTNRKMPKQKGKAAIELSSL
NT seq
3021 nt
NT seq
+upstream
nt +downstream
nt
atggctgatttcttggagcaatgggtaaatgatgaattgtatacgctggtgggttgcagt
gatcgtactgctgtgcaatatatcttagcactggcacgaaagtcaatagatgctgaagat
ttattagggcgtttgcgaagtacggatacaatggaagatacgccagctgtgaggaaattt
atcagtgagttgattgcacgagtaccacatgcagctgccaaaagagaaaaagttatacaa
ccctcagcagctgaattacgtgcgaaagaaatcatgcgtctaaatcgagatctaaagaca
atagaatctgatgatgaagacgatgtatcaactagaaaacgtgaaaagaaaaagaaacgc
aaaagcataattcccatgaaagaaagcgcaagtgatgagatggatcggataaatgctgag
gaagagcaagatttgagagagcgtgatgaattagcggcaagaataagacaacgagacaag
gaaaaaactcgaaatatagtcacaaagtcagaaaaaaaagctgaggaagaagccgcgaag
aggctaaagttggaaacaaaagatcgcactaagatcgtttcacagttgcgtgaagaaagc
cggaaacagtatttatcgaagcgaaaggatgacaagctcgacgaacttgaaaaaattgtt
gaagatgatgaacatttttttgcgaatgaacgtttgacagaacgagaaaaaaaagatatg
aaatatcgaagagatatcctagaatatgcacggcagcatgagcgtgcagcagattttctc
aaaattaagcgttatcatgtcccggatgctaaagtgaaatcagttccgctggatagctta
gaagatgcagatgaaattccaaagggtgatggaaagcgttgggaagatgatcggttggct
gcagctatcgctaagtatggtgctaaagataagaagcgggatgaatttgaaatggttcta
gacgatgaaaaaattgatttcattcaagcttttcaaatgccggggacagcggacactgag
gagaaaatgttttcggctgctcagaaaaagaaaattacgctatctgagacacgaaaatcg
ctgccagtttatacttatcgagatgagttcatacaagcagttcacgatcatcaggtgctt
atcatcgagggtgaaacaggttctggaaaaactactcagcttccacagtatttgtatgaa
gcgggattctgtgtcaataaaatgaaagttggctgtacgcaacctcgtcgagtggcagcc
atgagtgtagcaacgcgagtagctgaggagatgggtgtgaaattaggaattgaagttggt
tattcaatacgtttcgaagattgtacatcagaaagaacagtggtcaaatacatgactgat
ggtatgctgctacgagaatttttgaatgaacctgatctagcgagttacagtgttattatc
attgatgaagcccatgaacgaacgcttcatacggatgttttatttggtttagtgaaggat
atagcacggtttcgtaaagatctcaaacttctggtttcttccgcaactcttgatgttgaa
aaattctctacattttttgatgatgctccaattcttaggatacctggcagacgcttccca
gtggatatttattatacaaaagctcctgaagctgattatcttgatgcagcgatggtttcg
attttacaaattcatttaacacaaccacttccgggtgatattctcgttttcttaactgga
caagacgaaattgaaacactgatggaatctttattagagagaacaaaatattttgggaag
aaaattaaagagcttattgttctgcctatttatgcgaatctgccatccgatttgcaagcc
aaaattttcgaaccaactccaccaaatgctcgaaaggttgttttggccacaaatatagct
gaaacctcggtgacaatcgatggaatttgttacgtgattgatcctggattcagcaaacag
aattcttttgacgctaggagtggtgttgaacatttgcatgttgtcactatttcaaaagct
gctgctaatcaacgtgctggaagagctggtcgaactggccctggaaagtgtttccgtttg
tatacagcttgggcttataaaaatgaattagaagatcagcctattccagaaatccaaaga
acgaatttgggcaatgttgtactgatgttgaaaagtttgggcatccatgatttagttcat
tttgactatctggatccacctccacaagaaactttagtaattgcgctagaacaattgtat
gcacttggagctttgaatcatcgcggtgaactgaccaaactaggaagacgtatggctgaa
tttccatgtgatccgtgtatgagtaaaatgattatcgcatctgaaaaatatggatgttct
gaagaaatcatcactattgctggaatgctatcatgtaatgcagcagtattttatcggcct
aaagccttggttatccatgcagatgctgctcgaaaaggtttttgggtaccaggtggagat
catcttactttgctcaatgtttataatcgctggcgagataccaactattcatcgcagtgg
tgcatggagaattttgttcagtatagaacgatgaaaaaagctcgggatgttcgtgatcag
cttgaaggtttattggaaagagttgaaatagaccaggtttcaaacaatgattcaatagca
attcgaaaaacaatcacagcaggatatttctacaattgcgccaaacttgatagtaacggg
cactataaaactgttaagcataagcacacagttcatattcatccaaattcctctctgttc
gaagaaactcctcgatggatgatttatttcgagcttgtgttcacatcgaaggaattcatg
cgcgaggtcatcgaaatcgaaagcagttggttaaccgaagtcgcaccacactattataga
gccaaagaactagaagattcgacgaaccgaaaaatgccgaaacaaaaaggaaaagctgca
attgaattgtcatcattgtga
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