Brugia malayi (filaria): BM_BM2183
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Entry
BM_BM2183 CDS
T01050
Symbol
Bma-crn-3
Name
(RefSeq) 3-5 exonuclease family protein
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
bmy
Brugia malayi (filaria)
Pathway
bmy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bmy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BM_BM2183 (Bma-crn-3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bmy03019
]
BM_BM2183 (Bma-crn-3)
Messenger RNA biogenesis [BR:
bmy03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
BM_BM2183 (Bma-crn-3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
PMC2NT
Motif
Other DBs
NCBI-GeneID:
6096837
NCBI-ProteinID:
XP_001893385
UniProt:
A0A0J9XPL0
LinkDB
All DBs
Position
Unknown
AA seq
847 aa
AA seq
DB search
MSGEQSASNSSDILDSIKNVKLCAVRAVGEANALPMRAEGYELYASFPVYANLMLEQQRR
ITVMLREVLQNAGCRIPLPTRISDLDEFLDRIVEANDSICERAGILLDLLQKARRMEEVV
VPQQILDAESTVASEQTLFERQGRYAALLRRLPGYKEKLSSPAITTAVPLLTSKEKPQIV
FGIEVDNSFAEFKPKLKEKHHAVENFVKNLQIVDCDNDGNQSTMWHNDQGTNLHPYHSEL
NHFKIPGRQLTIGVVEPLKALSDTELVYVDTLEKLRSLRDVLNKEQEFSVDLEHNAQRSF
LGLTCLMQISTRQMDYIIDPFPLWNDMHILNEPFTDPNILKVFHGADSDIVWLQRDFGIY
VVNMFDTYKAMRVLNFSKFSYQHLVQTCCNHTLDKKFQKADWRLRPLTIAHKTYARSDTH
YLLHCYDQLRKRLLSQENAANNLLEFVYNESAQTCLTVYKKPKFESDGYEKLLVGRKPLN
SRQQFALAALWKWRDERARTDDESPQYVLPCHMMLQIAEVLPREMQGILACCSPVPVHVK
QELHILHQIINTSRDQPLVKRPIYAPNIGSLTLEGVTSQLNKMNAVKAMLRCHLDFSSTK
YNEEIRDIVTQHDDKVKCENGATTGSGDGFLSTELYTIGEDNEMESERLTKVMEKLEDWA
TPYECYRIAIIEQSSKANSECKEKNEKTAKREQSAPEEKKLWSHLDSTTNNPGFTEEKMA
ASELQMESEKRKNAEEEMNIYEEMTLTKNELKKRRKRGAGEINIALMNDVSEIQKSSVEA
VGKRGRKNNWTDAGEKCDQRVDYSTFNPDIFNKNAVPISETYDPFKQWRRGRSKPQRGRR
VQRGRKL
NT seq
2544 nt
NT seq
+upstream
nt +downstream
nt
atgagtggagaacagtcagctagcaattccagcgatatattagattcaataaaaaatgtg
aaattatgtgcagttcgagctgttggagaagcaaatgctttaccgatgcgtgctgaaggt
tatgaactgtatgcaagctttccggtgtatgccaatcttatgttggaacaacagagaagg
attactgttatgttacgtgaagtattgcagaacgcgggttgtcgaattccattaccaaca
aggataagtgatcttgatgaattcttggatcgtattgttgaggcaaacgatagtatctgc
gaacgagcgggtatcttacttgatttgctacaaaaagctagacgtatggaagaggtggtt
gtaccacagcaaattcttgatgcggaaagtacagttgcatctgaacaaacattatttgag
agacagggacgttatgctgcacttttacgacgtttacctggatataaggaaaaattgtca
tcaccagcgattactactgcagttcctttgctgacatccaaggagaaaccgcaaattgtt
tttgggattgaagttgataatagctttgcggaattcaagccaaaactaaaggaaaagcat
catgctgtggaaaatttcgtaaagaatttacaaattgttgactgtgataatgatggtaat
caaagtactatgtggcacaacgatcagggaacgaatttacatccttatcacagtgaactg
aatcattttaagattccgggaaggcagttaaccatcggagtagttgaaccgctgaaggca
ctatcggacactgaattggtatacgttgatacgctagagaagttaagaagtttacgagat
gttttgaacaaggaacaagaattcagtgtagatcttgagcataatgcgcaacgttcattc
cttggattaacttgtctgatgcaaatttcaacacgtcagatggattacattattgatcct
tttccattatggaacgatatgcatatcctaaatgagccatttacggatccaaacatattg
aaggtttttcacggggcagattcggatattgtttggttgcaacgagattttggcatttat
gttgttaatatgtttgacacatataaagcaatgagagtgcttaatttttcaaaattttct
taccaacatttggtccaaacttgttgcaaccacactttagataagaagtttcaaaaagct
gattggcgtttaaggccacttacgattgctcataagacatacgctagaagtgatactcat
tatctgttacactgttatgatcaacttcgtaaaagacttctcagtcaggaaaatgctgct
aacaatcttctcgaatttgtttacaatgaatctgctcaaacttgtcttactgtttataaa
aagccgaagtttgaaagtgatggatatgaaaaattattggtaggaaggaaacccctgaat
tctcgtcagcagtttgctttggcagctttgtggaaatggcgtgatgagcgcgcaagaacg
gatgatgaaagtcctcagtatgtcttgccgtgtcacatgatgctacagattgctgaggta
cttcctcgggaaatgcaaggcattctggcatgttgtagtcctgttccagtgcatgttaag
caagaattacatattttacatcaaatcattaatacatcacgcgatcaaccacttgtaaaa
cgtccaatttatgcaccaaatattggttcgttgacattagaaggtgtcacatcgcaactg
aataaaatgaatgcagttaaagcaatgctaaggtgtcatttggatttttcatcaaccaaa
tataatgaagaaattcgtgacattgttacacaacatgatgacaaagtgaagtgtgaaaac
ggtgcaacaacaggtagtggtgatggcttcctttcaacagaactttatacaattggtgaa
gataatgaaatggaaagtgaacgtttaactaaagttatggaaaaattggaagactgggca
actccttatgagtgctatcggattgctataattgagcaaagttcgaaggcaaacagcgag
tgtaaagagaagaacgaaaaaacagcgaaaagggaacaaagtgctccagaagaaaagaaa
ttatggtcgcatcttgattccactacaaataatccaggatttactgaagaaaaaatggca
gccagtgaattgcaaatggaaagtgaaaagagaaaaaatgctgaagaagagatgaatatt
tacgaggaaatgaccttaacaaaaaatgagttaaagaaaaggagaaaacgaggcgcaggt
gaaattaatatcgcattgatgaacgatgtaagtgaaatacaaaaaagcagtgtagaagct
gtggggaaacgaggtcgaaaaaataattggaccgatgcaggggaaaagtgtgatcaacga
gttgactacagtacctttaatcctgatattttcaataaaaacgctgtaccaatttcggaa
acatatgatccattcaaacagtggagacgtggaagatcgaaacctcaacgtggccgccga
gtgcagagggggcgtaaactgtga
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