KEGG   Brugia malayi (filaria): BM_BM2459
Entry
BM_BM2459         CDS       T01050                                 
Symbol
Bma-lig-1
Name
(RefSeq) DNA ligase, putative
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
bmy  Brugia malayi (filaria)
Pathway
bmy03030  DNA replication
bmy03410  Base excision repair
bmy03420  Nucleotide excision repair
bmy03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:bmy00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    BM_BM2459 (Bma-lig-1)
   03410 Base excision repair
    BM_BM2459 (Bma-lig-1)
   03420 Nucleotide excision repair
    BM_BM2459 (Bma-lig-1)
   03430 Mismatch repair
    BM_BM2459 (Bma-lig-1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bmy03032]
    BM_BM2459 (Bma-lig-1)
   03400 DNA repair and recombination proteins [BR:bmy03400]
    BM_BM2459 (Bma-lig-1)
Enzymes [BR:bmy01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     BM_BM2459 (Bma-lig-1)
    6.5.1.6  DNA ligase (ATP or NAD+)
     BM_BM2459 (Bma-lig-1)
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     BM_BM2459 (Bma-lig-1)
DNA replication proteins [BR:bmy03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    BM_BM2459 (Bma-lig-1)
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     BM_BM2459 (Bma-lig-1)
DNA repair and recombination proteins [BR:bmy03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     BM_BM2459 (Bma-lig-1)
   NER (nucleotide excision repair)
    Other NER factors
     BM_BM2459 (Bma-lig-1)
   MMR (mismatch excision repair)
    Other MMR factors
     BM_BM2459 (Bma-lig-1)
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase DUF7458 mRNA_cap_enzyme
Other DBs
NCBI-GeneID: 6100253
NCBI-ProteinID: XP_042935232
LinkDB
Position
Unknown
AA seq 595 aa
MFSQLVGTTRNVENDWKTGEKIPYLCLAKTFEGIEATSSRLEIVKILASFFMKVIERTPS
ELATCVYLCVNKLGPTYEGMELGIAEGALMKAIAQATGRKIDKLKEDLNQKGDLGLVAQM
SRSNQRILFTPAPLTVTAVFHKLQDMAKTSGHMAMNKKVDMIKSLLVSCRDCEARYLIRC
LSGKLRIGLAEQSILAALANAFTDFEIKKTGEKLSCEKMKERQAEDILLLRSTYSECPDY
EKVVAAVLNGGLSKLPEKCKITPGIPVKPMLAHPTKGIAEVLKRFGGSVFACEFKYDGER
AQIHYDSSGIKIFSRNQENNTDKYPDLKELLKQIMDEETTSFIIDSEIVAFDPIHETILP
FQILSTRKRKNVGDSEIKVKVHVFMFDLLFWNGQSLTKSPYRKRREMLQRHFKEVGGVCG
FVASKDTEDTEQISEFLDDAIKGNCEGLMIKTLDVDATYEIAKRSHSWLKIGTGLTDDDL
RQQHQYFEELRIEKARPYYSYDSSLKPDVWFDPKIVWEVKAADLSISPKHFAARGIVDLE
KGISLRFPRYIRRRTDKTPEEATTSQQIADMYNNQEQIKNKVASSANDDNTDDYY
NT seq 1788 nt   +upstreamnt  +downstreamnt
atgtttagtcaattggttggaactacacgaaatgttgagaatgattggaaaacaggagaa
aagataccatatctctgcttggcgaagacattcgaaggtattgaagccacatcatcacgg
ttggaaatagttaaaatattggccagtttttttatgaaagtaatagaacgaacgccaagc
gaactggcaacttgtgtttatttgtgtgtgaataaacttggcccaacatatgaaggaatg
gagttgggcattgctgaaggagctttaatgaaagccatcgcccaagcgactggtcgtaag
attgataaactgaaggaggatctaaaccaaaaaggagatttgggtttggttgcgcaaatg
agtcgaagtaatcagcgtattttgtttactccggctcctcttactgtaactgcagttttt
cataaactgcaagatatggcaaaaacttccggacatatggcaatgaataaaaaagtggat
atgatcaaatcacttttggtttcatgtcgtgactgtgaagctcgttatctgataagatgt
ctgagcgggaagctgcgaattggtttggcagaacaatcaatacttgcagctcttgcaaac
gcattcactgattttgaaatcaaaaaaactggtgaaaaactgagctgtgaaaaaatgaag
gaacggcaagcagaggatatattactattgaggagtacatacagcgagtgtccagattat
gaaaaagtagtcgcagcggtgctgaatggtggtctgtcgaagttaccagaaaaatgcaaa
atcacaccaggtatacctgtaaaacccatgttagcacatccaacaaaaggaattgctgaa
gtgctaaaacgttttggtggatctgttttcgcttgcgaatttaaatacgatggcgaaaga
gctcaaatacattatgattcatctggtattaaaatattcagtcggaatcaagaaaataat
actgacaaatatccggatctgaaagaacttttaaaacagattatggatgaggagacgaca
tcttttattattgattcggaaattgttgcatttgatcctatacacgaaacgattttacct
tttcagattctttccacgagaaagaggaagaatgtaggtgacagtgaaattaaagttaaa
gtccatgtatttatgttcgatttgttattctggaacggccagtcactaactaaatctccg
taccgaaagcgacgagaaatgttgcaacggcattttaaggaagtgggaggtgtatgtgga
tttgttgcatccaaagatacggaagacacggaacagatttccgaatttctagacgatgcc
ataaaaggtaactgcgagggacttatgatcaaaacgcttgatgttgatgctacgtatgaa
atagcgaaacgatcacacagttggctaaagattggtacaggtttaactgatgatgacctt
cgccaacagcaccagtactttgaagaactcaggatcgaaaaggctcgtccttattattct
tacgatagctcattgaaaccagatgtatggtttgatccgaaaattgtctgggaagtgaaa
gcagctgatttgtcaatatctcctaaacattttgctgccagaggaatcgtagatctggaa
aaagggatctcactgcgatttcctcgatacattcggagacgtactgataaaacaccggag
gaagctaccacttcacagcagatagcggatatgtacaacaaccaggaacagatcaaaaat
aaagtagcaagtagtgctaatgatgataatactgatgactactactga

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