Brugia malayi (filaria): BM_BM2625
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Entry
BM_BM2625 CDS
T01050
Symbol
Bma-prp-4
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein hPrp4, putative
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
bmy
Brugia malayi (filaria)
Pathway
bmy03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bmy00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
BM_BM2625 (Bma-prp-4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bmy03041
]
BM_BM2625 (Bma-prp-4)
Spliceosome [BR:
bmy03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
BM_BM2625 (Bma-prp-4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40
WD40_Prp19
Beta-prop_THOC3
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
WD40_Gbeta
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_WDR36-Utp21_1st
WDR55
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
Beta-prop_Aladin
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
PRP4
Beta-prop_EML
Beta-prop_DCAF4
Beta-prop_RIG_2nd
Beta-prop_TEP1_C
NBCH_WD40
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
Beta-prop_WDR41
Beta-prop_EIPR1
WD40_RFWD3
eIF2A
Beta-prop_SCAP
Beta-prop_pof12
Beta-prop_WDR35_TULP_N
Nbas_N
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
6103260
NCBI-ProteinID:
XP_001899835
LinkDB
All DBs
Position
Unknown
AA seq
496 aa
AA seq
DB search
MGEAQQSNIPAVIQKVHFGSLANEEVVHKLQAEVEKREAERKDDQFDLEMVDNPMEREVM
AEFERRRRARTLTLPTDDGHVKLLLRKLDEPICLFGEDKLDRKERLRALLSTLSEEEVTR
ILHSPEETETVQQRDSSTWYHKGPVALRDVRVAIADFSLRRAQERLRKAHEEATRTTNDA
AVRAQEMHRWVAALTVYGSQVADVRPVSYCEFSPDSKHLITSGWSGECSIWSIPESSRER
RFVGHASQAGCARFHPGAYVSQESYALNAASCSHDGTVKLWSLESDSPLSELEPHSQRVS
RIAFHPSGRFLASCCFDCSWRLFDLQYGQEVLFQEGHSRPVFHADFQVDGSLIMTVGMDC
YGRVWDLRTGRCIMFLEGHQKEIHCGQWLPNGYQMVTGSADNSCMVWDLRIRRALKPIAA
HTSLVSGLRVESKGQYIITSSFDNSLKVWETCGWRPLRQLMGHDTKVMGVDISPDGKWVA
SVAFDRTFKLWTKQLY
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgggcgaggcgcagcaatcaaatattccagcagtaattcagaaggtgcacttcggcagt
cttgctaatgaagaagttgttcataaattgcaggcagaagttgagaaacgtgaagctgaa
agaaaagatgatcagttcgatttggagatggtggataatcccatggaaagggaagtaatg
gcagaatttgaaagacgacgaagagctcgtactttaactttacctacggatgatggccat
gttaaacttcttttgcgaaaacttgatgaaccaatctgtctttttggagaggacaagttg
gaccggaaggaaaggttgcgggctttgctatcaacattatctgaagaagaagttacaagg
atactgcacagtcctgaagaaacagaaaccgtgcaacaacgagattcatctacatggtat
cataaagggccagtagctcttcgggatgtccgcgtcgcgattgctgatttttctttgaga
agagctcaagaaagattacggaaggctcacgaagaagctactcgtacgacaaatgatgct
gctgtgcgtgcacaagaaatgcatcggtgggtcgcagcgctgactgtttatggttcacaa
gtggcagatgttagacctgtttcctactgtgaattttcacctgactcgaaacatctaatc
acttctggatggtcaggagaatgtagcatttggtcgataccagaaagtagtcgtgaaaga
agatttgttggacacgccagccaagcaggatgcgctagatttcatccaggggcatatgtt
tcgcaggaatcatatgcactgaatgcagctagttgcagccatgatgggacggtaaaatta
tggagcctagaaagtgattcgccactatctgaactggaaccacactctcagcgggtctct
cggattgcttttcatccatctggacgattccttgcttcttgctgttttgattgctcatgg
agactatttgatctgcagtatggacaggaagttctttttcaagaaggacacagccggccg
gtttttcatgccgattttcaagtggatggatcactcattatgacagtcggaatggattgt
tatggccgtgtgtgggatttacgaacagggcgctgtattatgtttttggaaggccatcag
aaagaaatccactgtggacaatggttaccaaatggttatcagatggtcacgggttctgcg
gacaatagttgcatggtttgggatttgaggataaggcgtgcacttaaaccaattgctgca
catacttctcttgtatctggtcttcgggtagaatcaaaaggacagtacattattacatca
tccttcgataactctctaaaagtttgggaaacttgcggttggcgtcctctacggcagctc
atgggtcatgatacgaaagtgatgggagttgacatatctcccgatggaaagtgggttgca
agtgttgcttttgaccgtaccttcaaactttggacgaaacagctttattaa
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