Brugia malayi (filaria): BM_BM3301
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Entry
BM_BM3301 CDS
T01050
Symbol
Bma-cpsf-4
Name
(RefSeq) Uncharacterized protein
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
bmy
Brugia malayi (filaria)
Pathway
bmy03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bmy00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
BM_BM3301 (Bma-cpsf-4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bmy03021
]
BM_BM3301 (Bma-cpsf-4)
03019 Messenger RNA biogenesis [BR:
bmy03019
]
BM_BM3301 (Bma-cpsf-4)
Transcription machinery [BR:
bmy03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
BM_BM3301 (Bma-cpsf-4)
Messenger RNA biogenesis [BR:
bmy03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
BM_BM3301 (Bma-cpsf-4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
Torus
zf-CCHC
zf-CCCH_2
zf-CCCH_4
zf-CCCH_3
zf-CCCH_12
zf-CCCH_RBM22
Nab2-like_zf-CCCH_
zf-CCHC_3
Motif
Other DBs
NCBI-GeneID:
6101369
NCBI-ProteinID:
XP_001897925
UniProt:
A0A0J9XRN9
LinkDB
All DBs
Position
Unknown
AA seq
337 aa
AA seq
DB search
MAAITATPYHHYSLFGSTPLTMEDYMSGVSCALLDVEEMLIQQRGAREAPFSGMDKSGRG
VCIRNEQGTCTMGAVCPLRHIVGDKAVVCKHWLRGLCKKGDQCEFLHEYDLSKMPECFFF
SKYMACSNRECPFRHIDPESKIKDCPWYDRGFCRHGPFCKHRHRRRVLCPNYLAGFCMDG
GDCKYAHPSFNIPPVDTTQILRARGQYNIGIVCHNCHERGHKATYCPHLPTQTQLPLLDS
SKVNAQISQELVALSEKKALSDVTCYKCGEKGHYANRCHKGLLAFLSNTAYLAHEQREKD
EKEARGNGQQFGSLGKPQQVPQPKVSNPTNKSGEMLR
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atggcagcaataacagctacaccatatcatcattattcactgttcggtagtactccgctt
acaatggaagattacatgtcaggggtatcatgcgccttactggatgtggaggaaatgttg
atacagcagcgtggagcgagagaggccccattttcgggaatggacaaaagtggccgtggt
gtatgtatacgtaatgagcaaggtacatgtacaatgggagctgtttgcccactgaggcat
attgttggagataaggctgtagtatgtaaacactggttgcgtgggttatgtaaaaaaggt
gatcaatgcgaatttttgcacgaatacgatttaagtaaaatgccggaatgtttctttttc
tcaaaatacatggcttgtagtaatcgtgaatgtccttttcgacatattgatcccgaaagt
aaaatcaaggattgtccatggtatgatcgtggattctgtcggcatggccctttttgtaaa
catcgacatcgtaggcgtgttctttgtcctaactatttggctggcttttgtatggatggt
ggggattgcaaatatgcacatccatctttcaacatcccacctgtggacacaactcaaatt
cttcgagcacgaggacaatataatattggaatagtatgccacaattgtcatgaaagaggc
cataaggcgacatactgccctcatttacctactcaaactcaattaccattgttagattca
tcgaaagtgaatgcacagatatcacaagaattggtagctctttccgagaaaaaagcgctt
tctgatgtaacctgctataagtgcggcgaaaagggtcattatgcaaatcgatgtcataaa
ggactgttagcatttctatcaaacacggcatatcttgctcacgaacagcgagagaaagat
gaaaaagaagccagaggaaacgggcagcagtttggaagtttggggaagcctcagcaagtt
ccacaacctaaagtatcaaatccgactaataaatctggtgaaatgcttcgctaa
DBGET
integrated database retrieval system