Brugia malayi (filaria): BM_BM3809
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Entry
BM_BM3809 CDS
T01050
Symbol
Bma-pole-1
Name
(RefSeq) DNA polymerase family B, exonuclease domain containing protein
KO
K02324
DNA polymerase epsilon subunit 1 [EC:
2.7.7.7
]
Organism
bmy
Brugia malayi (filaria)
Pathway
bmy03030
DNA replication
bmy03410
Base excision repair
bmy03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bmy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BM_BM3809 (Bma-pole-1)
03410 Base excision repair
BM_BM3809 (Bma-pole-1)
03420 Nucleotide excision repair
BM_BM3809 (Bma-pole-1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bmy03032
]
BM_BM3809 (Bma-pole-1)
03400 DNA repair and recombination proteins [BR:
bmy03400
]
BM_BM3809 (Bma-pole-1)
Enzymes [BR:
bmy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BM_BM3809 (Bma-pole-1)
DNA replication proteins [BR:
bmy03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
BM_BM3809 (Bma-pole-1)
DNA repair and recombination proteins [BR:
bmy03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
BM_BM3809 (Bma-pole-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF1744
POL2_thumb
DNA_pol_B_exo1
DNA_pol_B
zf-DPOE
zf_DPOE_2
DNA_pol_B_exo2
RNase_H_2
DZR
Motif
Other DBs
NCBI-GeneID:
6103263
NCBI-ProteinID:
XP_042936101
LinkDB
All DBs
Position
Unknown
AA seq
2116 aa
AA seq
DB search
MDQQTNNIQENYGSRLQKIHSAEFLDQKFGFQRYTDIEWKDAWLLNVQSAEMIDEQTKNI
IAVCDFYFIQEDGGRFKISYPFRPYLYIATLPSFEHQVLSYLSKKYASIITTNIVEKEDL
DLKNHLSGLKRTYLKISFPSLSELLKFKKDITPILKRNQEREKQTTSYTNLLTRHFGLQE
VLSDEGGVLEKIIDLREHDLPYQMRVCIDLEVFVGLWYRVTGRDLDRKPKITRHPTLIDP
PEPVVLAYDIEVTKLPLKFPDSSFDEIMMISYMVNGNGFLIINRQIISSDVDDFEYTPRP
EYKGIFRVINLPDEKTVIKYFFDHIIRLRPTVFVTYNGDSFDWPFVEARAAVHNLNMQTE
IGVSRNSSGEYRATNAVHLDAFKWVKRDSYLPVGSQNLKACTKAKLRYDPVELDPEQMCA
MAKDEPQMLANYSVSDAVATYYLYIKYVHPFIFALCTIIPLGPDDVLRKGSGTLCEALLM
VKAFQNNIIFPNKSLHYGTKYTTDGHVIESETYVGGHVEALESGVFRADIPEKFRIIPAA
ILDLKRDVRKTLSDSLIREFGVTMDEVIDFDKVVSKVETQLDDFIKRPLRLETPKIYHLD
VGAMYPNIILTNRLQPSAVVTNEDCIACVYNSPEAKCQRTMRWEWRGEIMPASRGEYERI
LQQLENETFGKPPRAFHSLDYEQRVQIEAKRVKDFCKRAYGKTHITRNEYRYTTICEREN
AFYVDTVKSFRDRRYEYKAMLKKAKAVLDEVSEDDIHALKTAQGRIVLYESLQLAHKCIL
NSFYGYVMRKGARWFSMEMAGIVCHTGANIITEARKLVERIGKPLELDTDGIWCLIPGTF
PENITFTLNSSKRKTVTVSYPGAILNALIHDKFTNNQFHQLEPDGTYSVTSENSIFFEVD
GPYLAMILPASREEGKKLKKRYAVFNFDGSLAELKGFEVKRRGELALIKYFQSSVFKAFL
KGESRAEAYEHAAKEANYWLDVLFSKGASLPDYELFDLIAENRSMSKKLDDYGEQKSTSI
STAKRLAEFLGDDMVKDVGLACRFIISKMPLDAPVAQRAIPLAIFQATPNVCAHYLRKWT
KDTKITKDNIDIRNIIDWEYYIERFGATIQKIISIPAALQNVPNPVPRVPFPDWLENKRQ
QRKNDHKQPKINEIFKKTAAPAFTPDIESISISRATNYSSLDNVTFFNDSQNLEKGSISI
QKTDRWMVIQKKTIVEHGVEEWLRYLKAKWKKEREEKKRKRQNALSKGITPIISVLERGK
QMMQDTVWQIIKISETPSKGLMVLWCIILDKMVKLNVRMPRIIYVNNREENGNSGILVKR
ILPRLKPVFNLRRYVIDERIFESSLNQLNKELCAMRIEGVYESQMPILFRAVLTLGCSCR
LKPNFKTNSASTYDSEQLEPDFSVQYLPENSIRTLFFYEHQQDSRCVIAVFNTASSEAHI
VVVNKTELNLPNLSNMYASEKTNLSSDVGVSFLNRKNDMNFIVSQCVTVERADRIIQRYI
RNLHHVDSYPVMIAVQSRQQLSALVKRLPSLDNYPLVRIHACEPSGLFNVLDWQRIVLRR
IIKHYFNMFLYLHQYVEVSRYLHVPIGNIPEDFSTFGPDVLFARSLINQGYVLWASPLSR
PDLGGKELDDARLNAVWSSLSVNKQSICVVNESCLETDICVELELGAVDVTAIVQSASIA
DAEGGVDSVGFLTGTVLSADALLGYVRSIAQYDEGAAVAGPLKVLRLLLHDCIKDIHLYG
NKIADQVIISLDRWLRTQHALMYDPAIVRVVDILITKLILLLVAELNRLGGRVIYASNSR
LIMCTKRSSLEHAQSFVNSLLLSLEEHSIFASLNVKAIKFWDILLWIDTNDYIGILLGEE
EEGNEVTVKLGTSNFIEGENYRNLFKQTLIGYLVLVARNVRSTNSVEEQQQYRLNLVGNE
VTEQMFDFLNNLSLSSDIRENIDLRDSIILMVKGISHFIGLDCIVYESISKLRYQLLRML
DVNDASYDGTWQSLNVSCTLTQLFCTVCCQSNDLDICQSEAWICPSCGKHFDSFTIEQLL
IERVNQLLIAYTIQDLKCTRCGAVRRHNLSLFCDCCGVEENIISPAELRFNLETIGKIAQ
QHDLMCLSELCEWTLF
NT seq
6351 nt
NT seq
+upstream
nt +downstream
nt
atggatcagcagacgaacaacattcaagaaaactatggttctcgtttgcaaaaaattcac
tcagcagaatttttggatcaaaaatttggtttccaacgttacactgatatagaatggaag
gatgcctggttgttgaatgttcagtcggcggaaatgatagatgaacagacgaaaaatatc
attgcagtgtgcgacttttatttcattcaagaagatggaggacgttttaagatatcctat
ccatttcgtccatatctatatattgcaacgcttccttcatttgaacatcaggtcctatca
tatttatccaagaaatatgcaagtataattacaaccaatatcgtggaaaaagaagacctt
gatttaaaaaatcatctatcaggattaaaacggacatatttgaagatttcattcccaagt
ttaagtgaacttctaaagttcaaaaaagatatcacaccaatactcaagagaaatcaggaa
agagaaaagcaaacaacttcatatactaatcttcttaccagacattttggtctgcaggaa
gtgctgtccgatgaaggcggtgttttagaaaaaattattgatttgagggaacatgattta
ccctaccaaatgagggtgtgcattgatctggaagtattcgtaggtctgtggtatcgggta
acaggaagagatctcgatcgaaagccaaaaataactcgtcatccaacgttgattgatcca
ccggaaccagttgttttagcttatgatattgaagttacgaagcttcctttgaaatttccg
gacagcagttttgatgaaatcatgatgatttcttatatggttaatggaaacggtttctta
attattaataggcaaattatttcctcagatgtggatgattttgagtatactccaagacca
gaatataagggaatattccgggttatcaatttgcctgatgaaaaaaccgttatcaaatat
ttttttgaccatatcattcggctgcgtccaactgtattcgtcacttacaatggcgattca
tttgattggcctttcgtagaagctcgtgctgcagtgcataatttgaatatgcagacggaa
attggtgtttcgagaaattcttccggagaatacagagctacaaatgcagtccatcttgat
gcgttcaagtgggtgaaacgtgatagttatctaccggtgggaagtcagaatctaaaagcc
tgtactaaagctaaacttcggtatgatccagttgagcttgatcctgaacaaatgtgtgca
atggcaaaagacgaacctcaaatgttggcaaactattcagtgtctgatgctgttgcaacc
tattatttatacattaaatatgttcatccattcatttttgcgttgtgtacaatcatacct
ctgggtcccgatgatgtacttcgcaaaggttccggtacactatgtgaagcacttttgatg
gttaaagctttccagaataatatcattttcccgaataaatccttacattatggaacaaaa
tataccactgatggacatgtaattgaaagtgaaacatatgttggaggccatgttgaagct
ttggaatctggtgttttccgcgccgatattccggaaaaatttcgaatcatcccggccgca
attctagatttaaaacgagatgttagaaaaacattaagtgattcattgattcgtgaattc
ggtgttaccatggatgaagtcattgattttgacaaagttgtaagtaaggttgaaacacaa
cttgatgactttattaagagacctttacgccttgaaactcctaaaatctatcatttggat
gtgggtgcaatgtatcccaatattatacttaccaatcgtcttcagccatcagcagttgtt
acaaatgaagactgtattgcttgtgtgtataattcaccagaagcaaaatgtcagagaacg
atgcgatgggaatggcgtggtgaaatcatgcctgcctcaagaggcgaatatgaacgcatt
ttgcaacaactagaaaatgaaacatttggtaaaccaccaagagcatttcatagcttagat
tatgagcaaagagttcaaattgaagcaaaacgggtaaaagatttttgtaaacgtgcttac
ggtaaaactcacataacgaggaatgagtatcgttatacgacgatttgtgaacgggaaaat
gcattttatgtggataccgtaaaatctttccgagacagacgatatgagtacaaagcaatg
cttaaaaaagctaaagctgttctagacgaagtatcggaggatgatattcatgctttaaaa
acagcccagggacgcattgttctctacgaaagtttgcagcttgcacataaatgcatctta
aactcattttatggatatgtcatgcggaaaggagcaagatggttttcaatggaaatggct
ggtatagtttgccatactggtgcaaatattatcaccgaagcgcggaagcttgtagaacgt
attggtaaacctctggaacttgatacagatggaatatggtgcttaattccggggactttt
ccggagaatattactttcactttgaacagttctaagcgtaaaacggtaactgtttcatat
ccgggtgcaattctcaatgcgcttattcatgacaaatttacaaacaatcaatttcatcaa
cttgaaccggatggaacatattctgtaacttccgaaaattccatatttttcgaagtagat
gggccatacttggcgatgattcttccagcttctagagaagaaggcaaaaaactgaaaaaa
agatatgcagttttcaattttgatggttcacttgctgagctaaaaggatttgaagtgaaa
cggcgtggcgaattagcactgattaagtatttccagagttcagtttttaaagcatttctt
aaaggcgaaagtcgtgcagaagcatatgagcatgctgcaaaagaagccaactattggctg
gatgtattattttcgaaaggcgctagtctgccagattacgaattgtttgatctaattgcg
gaaaatcggagcatgtcaaaaaaacttgatgattacggtgaacaaaaatcaacatctatt
tcaactgcgaagcgtcttgcagagtttcttggtgatgatatggttaaagatgttgggctt
gcttgccgttttattatttcaaagatgccacttgatgcacctgtcgcacaaagagctatc
cctttggctatattccaagcaacaccaaacgtctgtgctcattatcttcgaaaatggacc
aaagatacaaaaattaccaaagataatatcgatatccgaaatattatcgactgggaatat
tatattgaacgttttggagctaccattcagaaaattatctcaattccagctgctctgcag
aatgttccgaatccagttccacgcgttccatttccagactggttggagaacaagcggcaa
caacgaaaaaatgatcacaaacaacctaaaatcaatgaaatcttcaaaaaaaccgctgca
ccggcttttacacctgatattgaaagtattagcatttcaagagctacgaattacagttca
ttggataatgttactttcttcaacgattcacaaaacttagagaagggttcaatatctatt
caaaagactgaccggtggatggtgatacaaaaaaaaacaattgttgaacatggagttgaa
gaatggttacgatatttgaaggcgaaatggaagaaagaaagagaagagaagaagcgtaaa
aggcaaaatgctttatctaaaggtattacaccaattatttcagtgcttgaacgtggtaaa
cagatgatgcaagatacagtgtggcaaattattaagatatcagaaactccaagcaaaggt
ctgatggtattgtggtgtataattcttgataaaatggtgaaactcaatgtgcgaatgcca
cggattatttatgtaaataatcgtgaagaaaatggtaattctggtattctagttaagcgc
attctcccacgtttgaagccagtttttaatttacgacgatatgttatcgatgaaaggata
tttgaatcaagtttaaatcagttgaacaaagagctatgtgcgatgagaattgaaggtgtt
tatgagtcacagatgccgatactcttccgagctgtacttaccttaggctgtagctgtcga
ttaaaaccgaattttaaaacaaattcagcctccacatatgattccgaacaacttgaaccg
gatttctcggtgcaatatctcccggaaaatagtattcgcaccttgttcttttatgagcac
cagcaggacagtcgatgtgttatagcggtattcaatacagcatcaagcgaagcgcacatt
gttgtagtgaacaaaactgaattaaatttgccgaatttatcaaatatgtatgccagcgag
aaaacaaatttatcttctgatgttggtgtttcctttttgaaccgcaagaatgatatgaat
ttcattgtaagtcagtgcgttacggtcgaaagggctgatcgaataattcagagatatatt
cgaaatttgcatcatgttgacagttacccagtaatgattgctgtgcaatcgagacaacaa
ttatctgcattggttaagcgattgccatctcttgataactatcctcttgtgcgaattcat
gcttgtgaaccatctggtctttttaatgttctggattggcaacgtattgtcctgagaaga
attatcaaacattacttcaatatgtttctatatttgcatcaatatgtagaagtgagccgt
tatttgcatgttccgattggtaatataccagaagatttttctacatttggtccagatgta
ctatttgcacgaagtttgatcaatcagggatatgttctatgggcatcaccgcttagccga
ccggatcttggtggtaaggaactggatgatgcccgtctaaacgctgtttggtcatcactt
tccgtcaataagcaatcaatttgtgtggttaatgagtcctgcttggaaactgatatatgt
gttgagctggaattgggcgcagttgatgtcacagcaattgtgcagtcagcaagtatcgct
gatgcagaaggtggtgtggattcggtcggatttttgactggaactgttttgtcagcagat
gcgcttcttggatatgtccgaagtattgcacagtatgatgaaggcgccgcggtggcaggt
ccattaaaagtccttcgactattgttgcatgactgcatcaaagatattcatctatatggt
aataaaattgctgatcaagtaatcattagccttgatcgctggttacgcacacaacatgca
ttaatgtatgatcctgcaattgttcgcgtagttgatatactaatcaccaagctaatcctt
ttgctagttgctgaactaaatcgtttgggcggacgtgttatttacgcatctaattcacga
cttattatgtgcacgaaacgctcgtctcttgaacatgcgcaatcatttgtaaacagcttg
ctgttatcacttgaagagcactcaatttttgcatcactgaatgttaaagcaattaaattt
tgggatattttattgtggattgatacgaatgattatattggaattcttttgggtgaagaa
gaagaaggcaacgaagtcactgtgaaacttggtacatctaattttattgagggagaaaat
tatcgaaatttgttcaaacagacattaatcggatatcttgtcttagtagctcggaatgta
agatcaactaacagcgtagaggagcagcaacagtatcgcttaaatctggtggggaacgag
gttacagaacaaatgtttgatttccttaataatttgtcattaagttctgatattcgggaa
aatattgatttgcgagattcaattattttgatggtgaaaggaatatcgcatttcattgga
ctcgactgtattgtttatgaatcgatttcaaagttgcgttatcaacttctacgtatgttg
gatgtgaatgatgcatcatatgatggtacatggcaatcgttgaacgtttcgtgcaccttg
acccaattattttgtaccgtttgttgccagtcaaatgatttggatatatgccaatcagaa
gcatggatttgtccaagctgtgggaaacatttcgactcatttaccattgaacaacttcta
atagaacgagtgaatcagcttctgatcgcttatacaatacaagatttaaagtgtacacgt
tgtggagcggttcgaagacataacctttcccttttctgcgattgttgcggtgttgaggaa
aacattatatcacctgccgaacttcgcttcaacctggaaacgattgggaaaatagctcaa
caacatgaccttatgtgcttatctgaattatgtgaatggacgctgttctga
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integrated database retrieval system
