Brugia malayi (filaria): BM_BM4884
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Entry
BM_BM4884 CDS
T01050
Symbol
Bma-npp-1
Name
(RefSeq) putative nucleoporin Nup54, putative
KO
K14308
nuclear pore complex protein Nup54
Organism
bmy
Brugia malayi (filaria)
Pathway
bmy03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
bmy00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
BM_BM4884 (Bma-npp-1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bmy03019
]
BM_BM4884 (Bma-npp-1)
Messenger RNA biogenesis [BR:
bmy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
BM_BM4884 (Bma-npp-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup54
Nucleoporin_FG
HWE_HK
Exonuc_VII_L
DUF1664
Motif
Other DBs
NCBI-GeneID:
6098204
NCBI-ProteinID:
XP_001894750
UniProt:
A0A0J9XR36
LinkDB
All DBs
Position
Unknown
AA seq
492 aa
AA seq
DB search
MSLFGGSKLGTTSAATFGTSVSTPAFNFGTATSSTTNKPLFGSTTTTQSSLFGASTTTST
FAQSGGLFGSKPGATTSTTLLSSGTKPAGLPGTSTALPAQASQISTVQDLIQNSEYLIRS
LTSPDLFGDERDGIVAKLNQLLSACGVGNGYYKGDQQPISYTAENPFYQFKAIGYSRRSD
YCDSDGIIALTLGINYEQLSRATQRQKFIDSMNLILGNNTNVRAHIELIRPLPDNQTEVL
LYVTEKGKGRSSSKELCAFLKQPTQDIQLKSQLCVVNILPRTIVDDAKKHAFIKNPPAGF
DSQIWQQAVRENPDPDKLLPYPIRGFEQLRKRQELQAAEIRLEERIVEELNQKLMQINSK
LITGQNQCSYQRQRHKELSHRLLRCLAMQSLLQQYTISIDSAEEKLETRLEALNASLVAP
DQIKSRINDLLATLRDEAENLKAIGGTKLGLTESDVTQIKRYLSRAQEALERVVDVVRES
TEDLNIIETHLK
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgagtttgttcgggggatcgaaactaggcactacttcagctgcaacttttggtacttca
gtttctacaccagcttttaactttggaactgcaacttcaagtacaaccaataaaccatta
tttggctccacaacgactacacagtcgtctttgttcggcgcctcaacaacgacatccact
tttgcacaatctggaggattatttggctcaaaacctggggcaacaacttcaacaactctg
ttatcgtctgggacgaaaccagctggtttaccaggtacttcaaccgcattacctgcacaa
gcttcacaaatctcaacagtgcaagatttgatacagaactcagaatatctcattcgatct
ttaacatcaccagatctttttggggatgaaagagatggaattgttgcgaaattaaatcag
cttttgtctgcatgcggagttggtaatgggtattataaaggcgaccaacaacctatttct
tatacagcagaaaaccctttttatcagtttaaagcgattggttatagtagaagaagtgat
tattgtgatagcgatggtattatagctttgactctaggaattaattatgagcagctttca
agagccactcaacggcaaaaattcatagattcgatgaacctcatattaggcaataataca
aatgttcgagcgcatattgaacttattcgtccactccctgataatcaaactgaagttcta
ctatatgtaacagagaaaggcaaaggcaggtcaagtagcaaagaattgtgtgctttcttg
aagcaacctacgcaagatatacaattgaagagtcagctttgtgttgtgaatattcttccg
cgtacaatagtggatgatgcgaagaaacatgctttcattaaaaatcctccagcgggattc
gattcgcagatttggcagcaagctgtgcgagaaaatccagatcctgataagttgcttcct
tatcctatccgaggttttgaacaattacgtaaaagacaagaattacaggcagcagagata
cgtcttgaggagcgtattgttgaagagctaaatcaaaaacttatgcaaattaatagtaaa
ttgataacgggacaaaatcaatgttcgtatcagcgacaaagacataaagaattatcgcat
cgtttgttacgttgtttagcaatgcaatcccttcttcagcaatatacaattagcattgat
agtgctgaagagaaactcgaaacacgtcttgaagcattgaatgcttctcttgtagcaccg
gaccaaatcaagagtcgaattaatgatttattagcgactttgcgtgatgaagcagaaaat
ttgaaagcaataggtgggacaaaactgggattaactgaaagtgatgttacacaaattaaa
agatacttatctcgagctcaggaagcgcttgaaagagttgttgacgtagttcgtgaaagt
actgaagatcttaatattatagaaacgcatctgaaatga
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