Brugia malayi (filaria): BM_BM5419
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Entry
BM_BM5419 CDS
T01050
Symbol
Bma-pcf-11
Name
(RefSeq) Uncharacterized protein
KO
K14400
pre-mRNA cleavage complex 2 protein Pcf11
Organism
bmy
Brugia malayi (filaria)
Pathway
bmy03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bmy00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
BM_BM5419 (Bma-pcf-11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bmy03021
]
BM_BM5419 (Bma-pcf-11)
03019 Messenger RNA biogenesis [BR:
bmy03019
]
BM_BM5419 (Bma-pcf-11)
Transcription machinery [BR:
bmy03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
BM_BM5419 (Bma-pcf-11)
Messenger RNA biogenesis [BR:
bmy03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
BM_BM5419 (Bma-pcf-11)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CID
Pcf11_C
New_glue
Pfc11_Clp1_ID
zf_PCFS4
zf_UBZ
CelTOS
Motif
Other DBs
NCBI-GeneID:
6103781
NCBI-ProteinID:
XP_042932871
UniProt:
A0A7I4NMA2
LinkDB
All DBs
Position
Unknown
AA seq
866 aa
AA seq
DB search
MAKNAEEAALEYRQALDDLKDNNKMQINLMTILADDYNSFSKEIVAVIAQQIMKVIPPQK
LAVMYVMDSILKNVTGAGNYKEHIEKIVYKVFLHVFETGDERTRLALHKLRQTWTGIFQR
STLYKIDLAVNAIDPAWPIVTPQPVNTPVPGSRPQPVVMTSHQPRAAAKVHVNPHFLQKN
SVTSTSATTTTTTTTATTTTIITTATTTTTTSATVDNKLQMNCEKKKIGLDPRLMKHSDG
ATNTRPMPLVASHPANAIVKQEPIDSSDVDERLNTQQTGNLLDSTSARSFVHRKEHEFGR
RSPNDIKRKSPPCISDVETMEKKPRIRTPPHERDRRTNSPSTSSAIIRPTNDLGSHAFIT
TARRAQVPSSTNMLTAPPTQVMVPVSGPVILPAIPSTSGPLRFLPPIMPAVPLPMPVPNM
ASILAGSPVISASTNHQDLTRTDSNRVPPIINNETPKLEGIPANNRIFVDGRAYEVSYIN
DVPVIERNGLPHRIYFTGVPRNVIIDGVAYQLAFGEEKRVIIDGEEHVLRFGAPSRELYM
GTYPFKGAFGGPPIFATINGVRHEIRLGGPPPEVKIEPDPCYELLRYMPRIGAETSNKTA
ASSGTEPHAAVDVKGLLAKLQRTGILSALNVNSRRDETGGGDSPNRSVTPPIPSEHRGEV
TERLPRPPTDLKSFSMRALRIRYTSVVESLHQKRRLCPNCGLRFSELKGERYQQHLDWHF
RENLKSNESSRCREWYLPVDEWYEFSEQEELSASTSATRLAGAGSNDAAKDANRGTYSIP
SDSVPSKECGVCKEKFEEYWDEDDDIWKLRDCMLGQDGRIFHPGCILDASVIRIPEDDSP
SEEEQNDKLSFLKSLKLKKDFPSLDS
NT seq
2601 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaaaatgctgaagaagctgcgcttgaatatagacaagcattggatgatttaaaa
gacaataataaaatgcagattaatttgatgactatccttgccgatgattataattcattt
tccaaggaaattgtcgctgttattgctcaacagattatgaaagttataccacctcagaaa
ttggctgtgatgtatgttatggattcaatattgaaaaatgtaactggtgctggtaactac
aaagaacatattgaaaaaattgtttacaaagtctttctgcatgtttttgaaacgggtgat
gaaaggacacgtttggcactacataaactcagacagacttggacaggaatatttcaacgt
tcaacgttgtataaaatagatttggctgtaaatgcaattgatccagcttggccgatcgtt
actcctcaaccagttaacactccggtacctggatctaggccacaacctgttgtaatgacg
tctcaccaacctcgagcagcagcaaaagttcatgtcaatccacactttttgcagaaaaat
tctgttacatctacgtctgctactactactactactactactactgctactaccactact
attattactactgctactactactactactaccagtgctactgttgacaacaaattgcaa
atgaactgtgagaagaaaaagataggtttggatccgagattgatgaaacattctgatgga
gcgacaaataccagaccaatgccattagttgcatctcatccggcaaatgccatcgtcaag
caggagcctatcgacagcagtgatgttgatgaaagattaaatacacaacaaactgggaac
ctcttggatagtacaagtgctcggagttttgtacacagaaaagaacatgaattcggtaga
cgttcaccaaacgatataaaacgtaagtctccaccatgtatctctgatgtggaaactatg
gagaagaaacctcgaatacgtactccacctcatgaaagagatcgtcgtacgaattcgcct
tcaacatcttccgccataatacgcccaacaaatgatctcggttctcatgctttcattacc
acggcacgacgcgcacaagtgccctccagtacaaacatgttgacagcaccgcctactcaa
gttatggtaccagtctccggaccagtaattttgcctgcaattccatctacctctggccca
ctacgatttctaccacctataatgccagcggtacctttaccaatgccagttcccaatatg
gcttcgattctagcaggttctcctgtcatttctgcctccacaaatcaccaagatttaaca
cgaaccgattcaaaccgtgtaccaccaatcatcaataacgaaactccaaagctggaaggt
attccggcaaataacagaatatttgtggatggtcgagcctacgaagtttcatatattaat
gacgttccagttattgaaaggaatggcttgccgcataggatctattttacgggtgtgcca
cgaaatgttatcattgatggtgtcgcttatcaactagcatttggtgaagagaaaagagta
ataattgacggtgaagaacacgttttaagatttggtgctccatcacgtgaactgtatatg
ggaacttatccattcaagggtgcatttggtggtccaccgatttttgctacgattaacgga
gtacgccatgaaataagattgggtggtcctccaccagaagttaaaattgaacctgatcca
tgttatgaactactacgatatatgcctcgtataggtgctgaaacgtcgaacaaaactgca
gcctcaagtggaaccgaacctcacgcagcggttgatgttaaaggtttgcttgccaaactg
cagcgtaccggaatactttctgctttgaatgtgaatagcagaagagatgaaacaggagga
ggagattcacctaatcgatctgttacaccacctattccttctgaacatcgtggtgaggta
accgaaagactgccgagaccgccaactgatcttaaatctttctcgatgcgtgctctcaga
atacggtatacgtctgtggtggaaagccttcatcagaaaagacgtctttgtcctaattgc
ggtttacgctttagtgagcttaagggtgaaaggtaccagcagcatcttgactggcatttt
cgtgaaaatctaaagtcaaatgaaagttcacgttgccgtgagtggtacttgccggttgat
gaatggtatgaatttagtgaacaagaggaattatcagcatcgacatcagcaactcgtctt
gctggtgctgggtctaatgatgcagcaaaagatgcaaatagagggacatatagcatacca
tctgactcagttccatctaaggaatgtggtgtatgtaaagaaaaatttgaagaatattgg
gatgaagatgatgacatatggaaacttcgggactgtatgcttggccaggatggcagaata
ttccacccaggttgtatactggatgcatcagtcatccgaataccagaagatgatagcccg
agtgaagaagagcaaaatgataagttgtcattcctgaaatctttgaaattaaaaaaagat
tttccttctctggatagttga
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