Brugia malayi (filaria): BM_BM6634
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Entry
BM_BM6634 CDS
T01050
Symbol
Bma-exos-1
Name
(RefSeq) 3-5 exoribonuclease CSL4 homolog, putative
KO
K07573
exosome complex component CSL4
Organism
bmy
Brugia malayi (filaria)
Pathway
bmy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bmy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BM_BM6634 (Bma-exos-1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bmy03019
]
BM_BM6634 (Bma-exos-1)
Messenger RNA biogenesis [BR:
bmy03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
BM_BM6634 (Bma-exos-1)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
BM_BM6634 (Bma-exos-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ECR1_N
EXOSC1
UBR1-like_wing
Motif
Other DBs
NCBI-GeneID:
6105613
NCBI-ProteinID:
XP_001902194
UniProt:
A0A0H5S559
LinkDB
All DBs
Position
Unknown
AA seq
216 aa
AA seq
DB search
MNTSNSSSSGSNAFFRGEGCSKYVIPGDRLFPISEQLKAGIGTYELFGHIYASLAGTMHM
YTTVERDKETKIVEVRRESEKEKRHVMPYVGCIVTAKVQNIGQRFAKCTIHCVECSVLSH
EFNGVLRKEDIMPIEKEKVKLEQCIHPGDVILARVIGFGDNQHSYLLSTVEDELGVVSGI
GDLGERMIPCSFGEIKSVISGTREPRKVAHIPDLNH
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atgaatacaagcaacagtagcagcagcggcagcaatgcatttttcagaggtgaaggatgc
agcaagtatgtgataccaggtgatcggctctttcctattagtgaacagttgaaggcaggt
atcggtacctacgaattgttcggacatatttatgcatcactagctggtaccatgcatatg
tatacaactgtcgagcgtgacaaagaaacaaaaatagtggaagtgcgacgagaatcggaa
aaagagaaacgacatgtcatgccatacgtggggtgtattgtaactgcaaaggtgcaaaat
attggtcagaggtttgccaagtgtacgatacactgcgtggagtgttctgttttatctcac
gaatttaatggagtattgaggaaagaagatataatgcctatcgagaaagaaaaagtaaaa
ctagagcaatgtatacatcccggtgatgtcatcctggcacgtgttattggcttcggtgat
aatcagcattcatatttactcagtaccgtagaagatgaattgggtgttgtgagcggtatt
ggtgatttgggtgaacgaatgataccatgttcttttggtgaaataaaatcagttatatca
ggtacacgtgaacctcgaaaagttgcgcatatacctgatctgaatcattga
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