Brugia malayi (filaria): BM_BM6673 Help Entry BM_BM6673         CDS       T01050                                  Symbol Bma-smg-2 Name (RefSeq) Uncharacterized protein   KO K14326   regulator of nonsense transcripts 1 [EC:5.6.2.5 5.6.2.3] Organism bmy  Brugia malayi (filaria) Pathway bmy03013   Nucleocytoplasmic transport bmy03015   mRNA surveillance pathway Brite KEGG Orthology (KO) [BR:bmy00001]  09120 Genetic Information Processing   09122 Translation    03013 Nucleocytoplasmic transport     BM_BM6673 (Bma-smg-2)    03015 mRNA surveillance pathway     BM_BM6673 (Bma-smg-2)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:bmy03019]     BM_BM6673 (Bma-smg-2) Enzymes [BR:bmy01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.3  DNA 5'-3' helicase      BM_BM6673 (Bma-smg-2)     5.6.2.5  RNA 5'-3' helicase      BM_BM6673 (Bma-smg-2) Messenger RNA biogenesis [BR:bmy03019]  Eukaryotic type   mRNA surveillance and transport factors    Surveillance factors     Surveillance complex      BM_BM6673 (Bma-smg-2)    mRNA cycle factors     Common to processing body (P body) and stress granule      BM_BM6673 (Bma-smg-2) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  UPF1_Zn_bind AAA_12 AAA_11 UPF1_1B_dom AAA_30 AAA_19 ResIII DEAD AAA_16 UvrD-helicase NPHP3_N SLFN-g3_helicase AAA_22 NAT10_TcmA_helicase nSTAND3 ATPase SRP54 PhoH UvrD_C_2 nSTAND_NTPase5 Herpes_ori_bp AAA_10 AAA_32 Motif Other DBs NCBI-GeneID:  6104675 NCBI-ProteinID:  XP_042936379 UniProt:  A0A4E9FJH2 LinkDB All DBs Position Unknown AA seq 1052 aa AA seqDB search MVDSLEDEYGTPSLSLNFVDTPDGDSSLLHGATQDSQFEFDQQFTLPSQGWTSTLPEVGG DQSQELVFVDEEEFSVPGQLPTHACRYCGIHDPATVAMCMVCEKWFCNGRGSTSAGHIVI HLVRSQHKEVSLHKEGALGETVLECYQCGSKNIFMLGYIPAKADTVVVVLCRSPCANQAV LKDHSWQVDEWKPLISDRQLLSWLVKIPSEQEQLRARQISAVQINRLEELWKEDPKAVFE DLERPGMDEEPEHVQLKYEDAYQYKRVFEPLVKAEADYDRREKESQTQSVGHVRWDIGLN RKPQAFFQLPKFSEGSMKLMLGDELRLKHSQTAGGEWSSVGCVIKIPDNHNDEVGIEMRL KAENVPTDTRTNFTCEFVWNSTSFERMQAALSLLGQDEDCVSQFIYHKLMGHDIDDIIFK VSLPKRFSVPGLPELNHSQVHAVKTVLQRPLSLIQGPPGTGKTVTSATIVYHLVKQTNGQ VLVCAPSNIAVDQLAEKIHRTGLKVVRLCAKSRETLDSPVAFLALHNQLRALHGAAELHK LQQLKEEMGELADADERRFRALRIAKECQLLTAADVICCTCVSAADSRLSHMRIKCVLID ESTQATEPEVMVAVVCGVRQLVLVGDHCQLGPVIMCKKAAKAGLSQSLFERLVLLGNRPI RLQVQYRMHPALSSFPSNVFYEGSLQNGERQLIGIDWQWPVPDKPMMFWSCYGQEELSSS GTSFLNRTEAANVEKLATRFLKAGLKPEQIGIITPYEGQRSYIVQFMQTQGALHSKLYLE MEVANVDAFQGREKDIIIVTCVRSNDHQGIGFLNDSRRLNVALTRAKFGLIIVGNAKVLS RHPLWNYLLSMFKEKGCLVEGPLNNLKPSPITLSKPRRIPNIMSMNRFIPRGVVLAKDMQ GNAFGTRNRDLRSIQDPFAAITHGQLRPQNGINIPVPIQMFVQPPPHYYPLHTRHGDLNS VDSTTRNRKHLEGINMFSSQQSQDPIYMQQLGEMSGISQDVSDWTQSQTQHGASQGGVPY SQDQLLVSQMESLFLSQDANAENYNFGDVSQY NT seq 3159 nt NT seq  +upstreamnt  +downstreamnt atggtggattctttggaagatgagtacggcactccatctttatcactgaatttcgtggat acgccggatggcgattcctccttacttcatggagctactcaggattcacagtttgaattt gatcaacagtttacacttccttcacaaggatggactagtactcttcctgaagttggcggt gaccaatcgcaggaattggtatttgtagatgaagaagaattttctgtaccaggacaacta ccaacacatgcgtgcagatattgcggcatacatgacccagctacagtggcgatgtgcatg gtgtgtgagaaatggttttgtaatggacgtggaagtacgtctgctggtcatatagtcata catttggtgcgttcgcaacacaaagaagtttccctacacaaagaaggtgcgcttggtgaa acagtcctggagtgttatcagtgtggttcgaagaacatttttatgcttggttatattcct gcaaaagcagacacggttgtagtggtgctctgtcgttcaccttgtgctaatcaagctgtt ttgaaggaccattcctggcaggtggatgagtggaaacctttgatcagtgatcgacaattg ctgtcttggcttgtaaagataccatctgagcaggaacaactaagggctcgtcagataagt gctgtacaaatcaaccgacttgaagaactttggaaagaagatcccaaagctgtgtttgaa gatctggaaaggccaggcatggatgaggaaccagaacatgtgcagctaaaatatgaagat gcatatcagtataagcgtgtatttgaacctttagtaaaagctgaagctgattatgaccga agagaaaaggaatcacaaacacagagtgttggtcatgttcgttgggatattggtctcaat cgaaaaccacaagcttttttccaattgccaaagttttcggaaggaagtatgaagttgatg ttgggagatgagttgcgcttgaagcattctcaaactgcaggtggtgaatggagttcggtt ggatgtgttatcaaaattcccgacaatcataatgatgaggttgggatcgaaatgcgttta aaggcagagaatgtacccacggatacacgaacgaactttacatgtgaatttgtttggaac tcaacatcatttgaaagaatgcaggcagcgttgtctttattgggtcaagatgaagattgt gtttcacagtttatctatcacaagttaatgggccacgatatcgatgatattatttttaaa gtatctttgccgaagagatttagcgtaccgggtttgccagagctaaatcacagtcaagtg catgcagtcaaaactgttttacaacgacccttatcactaattcagggaccacctggaact ggcaaaactgtgacttctgctacaatcgtatatcatctagtaaagcaaactaatggtcaa gtacttgtatgtgctccgtcaaatattgcagttgatcagttagctgagaaaatacatcgt acaggattaaaggttgtccgtctgtgtgcaaaaagtcgtgaaacgcttgatagtcctgtt gcctttctcgcgttacataatcagctgagagccttacatggtgcagctgagttgcataag ttgcagcagttgaaagaagaaatgggagaattggcagatgctgatgagcgccgctttcgt gctttgcgtatagcaaaggaatgccaactgttgactgctgctgatgttatctgttgtaca tgtgtttcagctgccgatagccgtctctcacatatgagaattaaatgtgttttaattgac gaatcaacccaagctacggaacctgaagtaatggtagctgttgtttgtggtgttcggcag ttggtacttgttggcgaccattgtcaattgggtcctgttatcatgtgtaagaaggcagct aaagctggtttatcacagtcactttttgaacggcttgttttgctcggaaatcgtccaatt cgcctacaggtgcaatatcgtatgcatcctgcgctttcttcatttccaagcaatgttttt tacgaaggaagtttacaaaatggggagcgacaattaattgggattgattggcagtggcca gtgccagataaaccaatgatgttttggagttgctatggccaagaagagcttagctcgtca ggcacatcatttctaaaccgaactgaggcagctaacgttgagaaactagccactcgattt ctgaaagctggattaaaaccggaacaaattggtataattactccttatgaaggacaaaga tcgtacattgtgcagttcatgcaaacacagggtgctttgcatagtaaattgtatctggaa atggaagttgcaaatgtggatgcttttcagggccgtgaaaaggatatcataatagtgact tgtgttcgatctaatgaccatcaaggcattggttttctgaatgattccagacgtttaaat gttgcactaacacgtgctaaatttggtcttatcatagtcggtaatgcaaaggtactatcg agacatccactttggaattatttattatcaatgttcaaagaaaagggttgcctcgttgaa gggcctctcaataatttgaaaccgtcaccaattacactttccaaaccgcgtcgtattcct aatattatgagtatgaatcgtttcattccacgtggagtagttctggcgaaagatatgcag ggtaatgcatttggtactcgtaatcgagatttgcgatcgatacaagatccattcgcagct attactcacggtcagttgcgacctcagaatgggatcaacatcccagtaccaatacagatg tttgtgcagccgccacctcattactacccacttcatacacgtcatggcgatttaaattct gttgatagtacgacacgaaatcgtaaacatttagaaggaataaatatgtttagttcgcaa cagtctcaagatcccatttatatgcagcagctcggtgaaatgtctggtatatcccaggat gtatcggattggacgcaatctcagacacagcatggtgcttctcaaggaggtgttccatac agccaggatcaattattggttagccaaatggaatcactttttctgtcacaagatgcaaat gcggaaaattataatttcggtgatgtaagccagtattaa

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