Bacillus pseudomycoides 219298: DJ92_1390
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Entry
DJ92_1390 CDS
T03239
Symbol
cshB
Name
(GenBank) DEAD-box ATP-dependent RNA helicase CshB
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
bmyc
Bacillus pseudomycoides 219298
Brite
KEGG Orthology (KO) [BR:
bmyc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bmyc03019
]
DJ92_1390 (cshB)
03009 Ribosome biogenesis [BR:
bmyc03009
]
DJ92_1390 (cshB)
Enzymes [BR:
bmyc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
DJ92_1390 (cshB)
Messenger RNA biogenesis [BR:
bmyc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
DJ92_1390 (cshB)
Ribosome biogenesis [BR:
bmyc03009
]
Prokaryotic type
rRNA helicases
DJ92_1390 (cshB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Helicase_RecD
Microtub_bd
Motif
Other DBs
NCBI-ProteinID:
AIK37840
LinkDB
All DBs
Position
complement(1301830..1303140)
Genome browser
AA seq
436 aa
AA seq
DB search
MTLQTFTQYNFQPFLIDAVRELRFSEPTEIQKKIFPVVKKGVSVIGQSQTGSGKTHAYLL
PTLNRIDVKREEVQLVITAPTRELAQQIYQEIVKLTKFCEEDQMITARCLIGGTDKQRSI
EKLKKQPHVVIGTPGRIKDLVEEKALFVHKATTIIVDEADLMLDMGFIQDVDKIAARMPK
NLQMLVFSATIPQKLKPFMKKYMENPEHIHINPKQVAAGNIEHYLVPSRHRNKIELVKNM
LLQFKPYLAIVFTNTKKKADEVADGLAERGLKVGRIHGDLSPRDRKKMMKQVRDLEFQYI
VATDLAARGIDIEGISHVINYELPSDLDFFVHRVGRTARAGYSGIAVTIYDPANEEALDS
LEKQRNIIFNHVDLRGDEWADLGDRRRRKSRKKPNDELDIMATKVVKKPKKVKPNYKRKL
ATERAKVKNKYSNKKR
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgacactacaaacatttacacaatataattttcaaccgtttttaatagatgcagttcgt
gaactacgcttttcagagccgacagaaattcaaaagaaaatttttcctgttgtgaaaaaa
ggtgtgagtgtaattggacagtcccaaacgggttctggtaaaacacacgcatatttactt
ccaacattaaaccgaattgatgtgaaacgagaagaggtccaactagtcattacagcgcct
actcgtgagttagcacaacaaatttatcaagagattgtaaagttaacaaagttttgtgaa
gaagatcaaatgattacagcacgctgcttaatcggaggaacagataagcaaagatccatt
gaaaaattgaaaaaacaaccgcatgttgttattgggacacccgggcgtattaaagatcta
gtagaagaaaaagcgctattcgttcataaagctactacgattattgttgatgaagcagac
ttgatgcttgatatgggattcattcaagatgtagataaaattgcagcgcgtatgcctaaa
aacttgcaaatgcttgttttctctgcaacgattcctcaaaaattaaaaccgtttatgaag
aagtatatggagaatccagagcatatccatattaatccaaaacaagttgcagcagggaat
attgagcattatttagttccttctagacatcgtaataaaattgaattagtgaaaaatatg
ttacttcaatttaagccgtatttagcaatcgtttttacaaatacaaagaaaaaagcggat
gaagttgcggacggattagcagagcgtggattaaaagtaggaagaattcatggtgattta
tcaccacgtgatcgtaaaaaaatgatgaaacaagttcgtgacttagagtttcaatacatt
gtcgctacagatttagccgcacgtggtattgatattgaagggattagccatgttattaac
tatgaacttccatctgatttagatttctttgttcaccgcgtaggaagaacagctcgtgct
ggatattcaggaattgcagtgacgatttatgatccagcaaatgaagaagcgttagatagc
ttagaaaaacaacgtaatatcatatttaaccatgtagacttacgtggagatgaatgggct
gatttaggtgaccgccgtcgtcgtaaaagtcgtaaaaagccaaatgatgaacttgatatt
atggcaacgaaagttgttaagaagccgaaaaaagtaaaacctaattataagagaaaactg
gcaacagaacgtgcaaaagtgaagaataaatacagtaataaaaaaagataa
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