Bacillus pseudomycoides 219298: DJ92_1796
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Entry
DJ92_1796 CDS
T03239
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
bmyc
Bacillus pseudomycoides 219298
Brite
KEGG Orthology (KO) [BR:
bmyc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bmyc03016
]
DJ92_1796
Enzymes [BR:
bmyc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
DJ92_1796
Transfer RNA biogenesis [BR:
bmyc03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
DJ92_1796
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
AIK39152
LinkDB
All DBs
Position
complement(1702453..1703007)
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AA seq
184 aa
AA seq
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MVPHYFLAVTLPDHIKEILENYKEEMKDKLPFRSWVYKEDYHITLAFLGSATQEQLQGIE
KGLQLLTNKTELDLTLQNFSIFGLVESPRIFWAGLKENQALFDMQKQVHAICERNGFSLE
TRPYHPHITVARKWMGEETFNLKDLKQLDAIVFQADTITLYESHVHQTPKYKSVYEIKLQ
NLKV
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
atggtaccacattattttttagcagttaccctgccggatcatataaaagaaatacttgaa
aattacaaagaagaaatgaaggacaagttgccatttcgctcatgggtatataaggaagac
tatcatattacccttgcttttttagggagtgcgacgcaggaacaattgcaaggaatagag
aaaggattacaactccttacaaataaaacggaattagatctcacgctgcaaaatttttct
atatttggcctagtagagagcccacgtatattttgggctggattaaaagaaaatcaagcg
ttatttgatatgcaaaaacaggtgcatgctatttgtgaaagaaacggtttttcgcttgaa
acacgtccctatcatccgcatattactgttgctcgtaagtggatgggagaagaaacattt
aatcttaaagatctgaagcaattagatgcgatagtgtttcaggctgatacgattacattg
tatgagtctcacgtccatcaaactccaaagtataagtcagtttatgaaataaagttacag
aatcttaaagtgtga
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