Bacillus pseudomycoides 219298: DJ92_2588
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Entry
DJ92_2588 CDS
T03239
Symbol
gyrB
Name
(GenBank) DNA gyrase, B subunit
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
bmyc
Bacillus pseudomycoides 219298
Brite
KEGG Orthology (KO) [BR:
bmyc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bmyc03032
]
DJ92_2588 (gyrB)
03400 DNA repair and recombination proteins [BR:
bmyc03400
]
DJ92_2588 (gyrB)
Enzymes [BR:
bmyc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
DJ92_2588 (gyrB)
DNA replication proteins [BR:
bmyc03032
]
Prokaryotic type
DNA Topoisomerases
DJ92_2588 (gyrB)
DNA repair and recombination proteins [BR:
bmyc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
DJ92_2588 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
AIK38546
LinkDB
All DBs
Position
2472940..2474862
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AA seq
640 aa
AA seq
DB search
MEQKQMQENSYDESQIQVLEGLEAVRKRPGMYIGSTSGKGLHHLVWEIVDNSIDEALAGY
CDEINVSIEEDNSIRVTDNGRGIPVGIQEKMGRPAVEVIMTVLHAGGKFGGGGYKVSGGL
HGVGASVVNALSTELEVFVHREGKIHYQKYERGIPAADLKVIGETDHTGTITRFKPDPEI
FKETTEYDFDTLATRMRELAFLNRNIKLIIEDKRENKQKKEFHYEGGIKSYVEHLNRSKQ
PIHEEPVYVEGSKDGIQVEVSLQYNEGYTNNIYSFTNNIHTYEGGTHEVGFKTALTRVIN
DYGRKNNILKDADSNLTGEDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFS
EAFEKFLLENPNVARKIVDKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCSSKD
PSISEIYIVEGDSAGGSAKQGRDRHFQAILPLKGKIINVEKARLDKILSNDEVRTIITAI
GTNIGGDFDIEKARYHKVIIMTDADVDGAHIRTLLLTFFYRYMRQIIEHGYIYIAQPPLF
KVQQGKKIQYAYNDKELEKILAELPAHPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQ
VSLQDAIEADETFEILMGDKVEPRRNFIQENAKYVKNLDI
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atggaacaaaagcaaatgcaggaaaattcatatgatgaaagtcaaatacaggtgcttgag
ggactggaagcagttcgaaaacgcccgggtatgtatattggatctacaagtgggaagggt
cttcatcaccttgtatgggaaattgtagataatagtattgatgaagcattagcaggatac
tgtgatgaaattaatgttagcattgaagaagataatagtattcgtgtgacggataatggt
cgtggtattccagttggtatacaagaaaaaatgggacgccctgctgtagaggttattatg
actgtactccacgcaggtggtaaatttggcggtggcggttataaagtttccggtggttta
catggtgtgggtgcatctgttgtaaatgctctatcaacagagttggaagtatttgtacat
cgtgaaggtaaaattcactatcaaaagtatgaacgaggtatcccagctgcagatttaaag
gtaattggtgaaacagatcatacaggaacaataactcgttttaagccagatccagaaatt
tttaaagaaactacagaatacgattttgatacattagcaacacgtatgcgtgaactagca
tttttaaatcgtaatattaaattgataattgaagataaacgcgaaaataagcagaagaaa
gagttccattatgaaggtggaattaaatcttatgttgagcatttaaaccgctcgaagcaa
ccgattcatgaagaacctgtatatgtagagggttcgaaagatggaattcaagttgaagtt
tctcttcaatataacgaaggttatacaaacaatatttattcatttacgaataatattcat
acgtatgaaggtggtacacatgaggttggtttcaagactgccctaacacgtgtaataaat
gattatggacgaaaaaataacatcttaaaagatgctgatagtaacctaacaggtgaagat
gtacgtgaaggactaacagcgattgtttccatcaaacatccgaatccacagtttgaggga
caaacgaaaacaaaacttggaaatagtgaagcgagaacgattacagaatctgttttctca
gaagcgttcgaaaagtttttacttgagaatccaaatgttgctcgtaagattgtggataaa
ggaacaatggcagcacgtgcacgtgtagcagcgaagaaggcacgtgaattaacacgccga
aagagtgcgctggaagtatctagtttgccagggaagcttgcagactgttcttctaaagat
ccttcgattagtgaaatttacatcgtagagggagattctgcaggaggttctgcaaaacaa
ggacgcgatcgccactttcaagcgattttaccacttaagggtaaaattattaacgttgaa
aaggcacgattagataagattttatctaatgatgaagtacgtacgattatcacagcgatt
ggtacaaatatcggtggggattttgatattgaaaaagctcgctatcataaagttattatt
atgaccgatgccgatgttgatggcgcgcatattcgtactctattattaacgttcttctat
cgttatatgcgtcaaatcattgaacatggttatatatatattgcacaaccaccattgttt
aaagtgcaacaagggaaaaagattcaatatgcttataacgataaagagcttgaaaaaata
ttagcagagttaccagctcacccaaaacctggtattcagcgttacaaaggtcttggggaa
atgaatccgactcaattatgggaaacgacaatggatccagaagtacgttcattacttcaa
gtttctctgcaagatgcaattgaagcagatgaaacgtttgaaattttaatgggtgataaa
gtagagccacgtcgtaactttatccaagaaaatgcaaaatacgtgaaaaaccttgatatt
taa
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