Bacillus pseudomycoides 219298: DJ92_2622
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Entry
DJ92_2622 CDS
T03239
Symbol
holB
Name
(GenBank) DNA polymerase III, delta' subunit
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
bmyc
Bacillus pseudomycoides 219298
Pathway
bmyc03030
DNA replication
bmyc03430
Mismatch repair
bmyc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bmyc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DJ92_2622 (holB)
03430 Mismatch repair
DJ92_2622 (holB)
03440 Homologous recombination
DJ92_2622 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bmyc03032
]
DJ92_2622 (holB)
03400 DNA repair and recombination proteins [BR:
bmyc03400
]
DJ92_2622 (holB)
Enzymes [BR:
bmyc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DJ92_2622 (holB)
DNA replication proteins [BR:
bmyc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DJ92_2622 (holB)
DNA repair and recombination proteins [BR:
bmyc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DJ92_2622 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNApol3-delta_C
AAA
AAA_5
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AIK38442
LinkDB
All DBs
Position
2505307..2506290
Genome browser
AA seq
327 aa
AA seq
DB search
MTRTWEQLSAIQPIGVKMLMNSIAKGRISHAYLLEGAKGTGKYETAIQMAKSFLCKQRNG
VEPCHTCTNCRRIDSGNHPNLHIVRPDGLSIKKQQIHDLQEEFSKTGLEANKKVYIIEHA
DRMTANAANTLLKFLEEPSSNTTAILLTEQSHQILNTILSRCQVVTFRPLSTESLIERLQ
GDGIAVSLSTLAAQLTNSFEEALLLCNDEWFAQARALVIKLCEALEKDTTSLFFVQEKWG
KHFGEKEQLQQGLDILLLIYRDLLYVQLGEEDRLVFQDQKEMFHSFSYAQKRIVSALFNI
LEAKNRINANVNAQLVFEQLVLRLQEG
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgacgaggacgtgggagcagctttctgctatacagcccattggtgtaaagatgttgatg
aatagtattgcaaaagggcgtatatcccacgcttatttgttagaaggtgcaaaaggaact
ggaaaatatgaaacggcaattcaaatggcaaaaagttttctttgtaaacaaagaaacggt
gtggagccgtgtcatacatgtacgaattgccgccggattgattcgggtaaccatcctaat
ttacatattgtaagaccagatgggttatctattaaaaaacaacaaattcatgatttacag
gaagagttttcaaaaacgggtttagaggcaaataaaaaggtatatattattgagcatgca
gatcgaatgacagcaaatgctgctaataccttattaaaatttttagaagaaccaagcagc
aatacaacagctattttacttactgaacaaagtcatcaaattttaaatactattttatct
cgttgccaagttgtgacatttagacctttgtctacagaatctttaattgagagactgcag
ggggatggaattgcagtttctttatctacccttgctgcacagcttacgaatagttttgag
gaagcgttattactgtgtaatgatgaatggtttgcacaagcacgagctttagtgataaaa
ttatgtgaagcgctcgaaaaagatacaacctctcttttttttgtacaagaaaagtggggg
aaacactttggagagaaggaacaattacaacaaggtttagatattttactccttatttat
agggatttattatatgttcaattaggagaggaagatcgtcttgtctttcaagatcaaaag
gagatgtttcattctttctcttacgctcagaagcgcattgtatcagctctttttaatata
ttagaagcaaaaaatagaatcaacgctaatgtaaatgcgcagcttgtgttcgaacagtta
gtgttgcggttgcaggagggatga
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