Bacillus pseudomycoides 219298: DJ92_2933
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Entry
DJ92_2933 CDS
T03239
Symbol
pcrA
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bmyc
Bacillus pseudomycoides 219298
Pathway
bmyc03420
Nucleotide excision repair
bmyc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bmyc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DJ92_2933 (pcrA)
03430 Mismatch repair
DJ92_2933 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bmyc03400
]
DJ92_2933 (pcrA)
Enzymes [BR:
bmyc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DJ92_2933 (pcrA)
DNA repair and recombination proteins [BR:
bmyc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DJ92_2933 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
DJ92_2933 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PcrA_UvrD_tudor
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
ResIII
AAA_22
DUF3217
Motif
Other DBs
NCBI-ProteinID:
AIK40612
LinkDB
All DBs
Position
2785959..2788190
Genome browser
AA seq
743 aa
AA seq
DB search
MSITDKLLNGLNPQQQKAVQTTNGPLLLMAGAGSGKTRVLTHRIAYLLGEKGVAPWNVLA
ITFTNKAAREMRERIDKLVGPEAEDIWISTFHSMCVRILRRDIDRIGINRNFTILDASDQ
LTVVKKIMKERNIDPKKFDPRSILSGISNAKNELLSADKYAKQISIADPFEKLTSDVYTE
YQKRLLKNNSLDFDDLIMTTIHLFERVPEVLEFYQRKFQYIHVDEYQDTNRAQYILVNKL
AARFKNLCVVGDSDQSIYRWRGADISNILSFEKDYENAQVILLEQNYRSSQNILNAANAV
IENNSNRKPKKLWTDNQIGSKISYYRAATEKDEAYFVAKKIRDEIQMGNRKYTDFAVLYR
TNAQSRMVEEIFLKSNIPYKIVGGIKFYDRKEIKDILAYLRLIANPDDEISFARIINMPK
RGIGATSIDKIINYGVQNGISLTAVMDEIEHVGVSAKITKAVKEFASQLHNWVNMQEYLS
VTELVEEVIEKTGYRDMLKNERSLEAEGRLENLDEFLSVTQTFESQSEDKSLVAFLTDLA
LVADIDRVDEDPTAGEEVILMTMHSAKGLEFPVVFIIGLEEGVFPHTRSLMEEDEMQEER
RLAYVGITRAEEELYLSNAQMRTLFGRTNMNAASRFISEIPTELLEPLNETAPKRETFSA
KGRSAGATTTTRSRSAFVRPTVKTTGGEQIGWAVGDKASHQKWGVGTVVSVKGEGDAKEL
DIAFPSPIGIKRLLAKFAPVTKQ
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atgagtataactgataaattattaaatggtttaaatcctcagcaacaaaaggcagtgcaa
acaacaaacggaccacttctattaatggcaggtgctggtagtggtaagacgcgtgtgcta
acacatcgcatcgcatacttacttggtgaaaaaggtgtagcaccttggaatgtattagca
attacttttacaaataaagcggctcgtgaaatgcgtgaacgtatcgataagcttgttggc
ccggaagcggaagatatttggatttctacgttccactcaatgtgcgtacgtattttacga
cgtgacattgatcgtatcggaattaatcgtaactttacgattttagatgcaagtgatcaa
cttacagttgtaaaaaagattatgaaagagcgtaatattgatccgaaaaaattcgatcca
cgttctattttatctggtattagtaatgcaaagaatgaattgttatctgctgataaatat
gcaaagcaaatttcaattgcggatccatttgaaaaattaacaagcgatgtatatacagaa
tatcaaaaacgtcttttgaaaaataactcattagattttgatgatttaattatgacgacg
atccatttatttgaacgtgttccagaagtattggaattctatcagcgtaagttccaatat
attcatgtggatgagtaccaagatacgaatagagcccaatacattcttgtaaataaatta
gctgctcgctttaaaaacctttgtgttgttggtgattctgaccagtccatttatcgttgg
cgtggggcggacatttctaacattttgtcatttgaaaaagactacgaaaatgcacaggtt
atcttgttagagcaaaactaccgttcatcacaaaatattttaaatgcggctaatgctgta
attgaaaataattcaaatcgtaaaccgaaaaaattatggacagacaatcaaattggaagt
aagatttcgtattaccgtgctgcaacggaaaaggatgaagcatattttgttgcaaaaaaa
attcgcgatgaaattcaaatgggaaatcgaaaatatacagattttgcggttctgtatcgt
acgaacgcccagtctcgtatggtcgaggagattttcttaaagtctaatattccatataaa
attgtcggcggcattaagttctatgatcgtaaagagattaaagatattttggcatactta
cgtttaattgcaaatccagatgatgagattagcttcgcacgtattattaacatgccgaag
cgaggaatcggtgccacgtctatcgataaaattattaactacggcgtgcaaaatgggatt
tcattaacggctgtaatggatgaaattgaacatgtcggagtaagtgcaaaaatcacaaaa
gcagtaaaagaatttgcaagtcaattacacaactgggtaaacatgcaagaatacttatct
gttacggaactagtagaagaagtgattgagaaaacgggttaccgcgatatgctaaagaat
gaacgttctttagaagcagaaggacgacttgaaaacttagatgagtttttatctgttaca
cagacatttgaatcgcaaagtgaagataagagtcttgttgctttcttaacagatttggca
cttgtagcagatattgatcgcgtggatgaggatccaactgcgggtgaagaagttatttta
atgacgatgcactcggcaaagggacttgaattcccagttgtctttattattggactagaa
gaaggagtgttcccgcatactcgctctcttatggaagaagatgaaatgcaagaggaacgc
cgtcttgcttatgtaggtattactcgtgcggaagaagagttatatttatcaaatgcccaa
atgcgtacgttattcggtagaacaaatatgaatgcagcatctcgatttatttcagaaatt
cctacggagttgctagaaccattaaatgaaacagcgccaaagcgtgagacatttagtgca
aaaggaagatcggctggggcaacaacgacaacacgttcccgctctgcatttgtgcgtcca
actgtgaaaacgacaggaggagagcaaattggctgggctgtaggtgataaagcgtcccat
caaaaatggggtgttggtacagttgtaagtgtgaaaggtgaaggagatgcaaaagaatta
gatattgcattcccaagtccaattggcattaaacgcttattagcaaaatttgcacctgta
acgaaacaatag
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