Bacillus pseudomycoides 219298: DJ92_4941
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Entry
DJ92_4941 CDS
T03239
Symbol
sbcD
Name
(GenBank) exonuclease SbcCD, D subunit
KO
K03547
DNA repair protein SbcD/Mre11
Organism
bmyc
Bacillus pseudomycoides 219298
Brite
KEGG Orthology (KO) [BR:
bmyc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bmyc03400
]
DJ92_4941 (sbcD)
DNA repair and recombination proteins [BR:
bmyc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DJ92_4941 (sbcD)
Archaeal homologous recombinant proteins
DJ92_4941 (sbcD)
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GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
Lipase_GDSL
ZW10_C2
DNA_pol_E_B
Motif
Other DBs
NCBI-ProteinID:
AIK36411
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Position
4824903..4826060
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AA seq
385 aa
AA seq
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MKFFHTADWHLGKLVHGVYMTEDQRIVLDQFVQAVEEEKPDAVIIAGDLYDRAIPPTEAV
DLLNDVLKKIVIDLQTPVIAVAGNHDSPDRIHFGSSLMKKQGLHIVGQFQFPYEPVVLHD
KYGEVHFHLIPYADPSIVRHVMKNEDIRSHDDAMRIFMNELSETMNQEARHVFVGHAFVT
SSGEAEENTSDAERPLSIGGAEYVNSHYFDKFHYTALGHLHQAHFVRNETIRYSGSPLAY
SISEERHKKGYYIVELDETGQVEIEKCLFTPRRQMRTVEAKIDDLLKYPTSEDYVFVKLL
DENPVLQPMEKIRSVYPNAMHVERSMQRREFTETNEVTVSRHKTDDLSLLKAFYREMKGS
DLSEEKERLFLDVLQTVQEREGERG
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgaagttttttcatacagcggattggcatttaggaaaacttgttcacggtgtgtatatg
accgaagatcaacgaattgtattagatcagttcgttcaagctgtggaagaagaaaaacca
gatgccgtaattattgcaggtgatttgtatgaccgagcgattcctccaacagaagcagta
gatttactaaatgatgtattaaaaaagatagtgattgatttacaaacgccagtaattgca
gtagcagggaatcatgatagtccagaccgtattcattttggcagcagtttaatgaaaaaa
caagggttacatattgttggccaatttcaatttccgtatgaaccagttgttttacatgat
aagtatggggaagtgcatttccatttaatcccatatgcggatccaagtattgtaagacat
gtgatgaaaaatgaagatattcggtcgcatgatgatgcgatgcgtattttcatgaatgaa
ctttcggaaacgatgaatcaagaagcaagacacgtatttgtaggccatgcatttgtcact
tcttcaggtgaagcagaagaaaatacgagtgatgcagagcgtccgctttccatcggcggt
gctgaatacgtaaatagtcattattttgataagtttcattacacagcacttgggcatttg
caccaagcgcactttgtacgtaatgaaacgattcgttattctggttcaccacttgcgtat
tctatttctgaagagcggcataaaaaagggtattatattgtggaattagacgaaacaggt
caagtggaaatagaaaagtgtttatttacacctcgtcgccaaatgcgaacagtagaagcg
aaaatagatgatttattaaagtatccaacaagtgaagattatgtcttcgtaaagttatta
gatgaaaatcctgtactgcagccaatggaaaaaattcgttctgtatatccaaatgctatg
catgttgaacgttctatgcaaagacgagaatttacagaaaccaatgaagttactgtttct
agacataaaacagatgatctatcccttttgaaagctttttatagagaaatgaagggctca
gatttatcagaagagaaagaacgtcttttcttagacgtattacaaacagtgcaggaacgg
gaaggtgaacgaggatga
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