Bacillus pseudomycoides 219298: DJ92_4942
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Entry
DJ92_4942 CDS
T03239
Name
(GenBank) AAA domain protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
bmyc
Bacillus pseudomycoides 219298
Brite
KEGG Orthology (KO) [BR:
bmyc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bmyc03400
]
DJ92_4942
DNA repair and recombination proteins [BR:
bmyc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DJ92_4942
Archaeal homologous recombinant proteins
DJ92_4942
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
SMC_N
GTP_EFTU
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
AIK37792
LinkDB
All DBs
Position
4826057..4829146
Genome browser
AA seq
1029 aa
AA seq
DB search
MRPLQLIMTAFGPYKQREVIDFSDLGDHRIFAISGNTGAGKTTIFDAICYVLYGEASGEE
RSDTSMLRSQFADDNIYTSVELTFRLKGKQYEIKRQLGHKKQGNKTVTGHAVELYEVIGD
EKVPCVDRFHVTDVNKKVEDLIGLSKHQFSQIVMLPQGEFRKLLTSETENKEEILRRIFK
TDRYKLMRELLDQKRKQWKDVLQEKQKERELYFRNVFKLPVRDDSLLETLVQQEHVNTHQ
VVEALEQEKNCYEAEVEQLQAQQTLQTQQLKKAEDRFHTAKSINEKFKDLQQKQEKQAVL
QANREQIETEEQRFKLAEQAKRLLPFEQWYEEAVQSEQNAEQLLKQISVKKEKTVKAFEL
AYEKYEELKGKESVREEGKKTVQRLEELQPIIASLAEKKSKLQQAELQSGKLKEGIQKFE
KQLEGQISQKQQIAGELQQLEVALEQYVAKVEELTNMREDAKVLKQAYDVWQEKQKYEQE
KEVANQKMEVAVKAYEEMEHRWLNEQAGMLALHLHEGESCPVCGSIDHPKKATERGDSID
EKQLNELREKKTVAEKLHVQVEEKWNFYRLQYEQVIDEVVKRGYRSEELVETYRTLVQNG
KQLAAEVNTLKESEEKRKQLALSVKGLEEKVEELQKQKREAEVMQHRTEMECMQLRTSYE
HDQQKTHEDLQTLEAWKKQFDQAVSTLRFMEEEWKKVQEAYQYWQNENIRIQAEYDGALK
QVSHAKEKQEETLLRFTTELEQGGFIDQQAYKEAKLTDVEMKHLHEKIQEYYSSLEVLAK
QIEELVNELSGKEWTDITALEEQMKELGIQLDITKEKRQRAQSAVAYITDLHENIRRIDE
QIHEEEKAFQELVDLYEVMKGDNESRISFERYILIEYLEQIVQIANERLRKLSNGQFYLK
RSERVEKRNRQSGLGLDVYDAYTGQTRDVKTLSGGEKFNASLCLALGMADVIQAYEGGIS
IETMFIDEGFGSLDEESLTKAIDALIDLQKSGRFIGVISHVQELKNAMPAVLEVTKQKNG
CSETRFVVK
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atgagaccacttcagcttattatgaccgcatttggtccgtataaacagcgagaagttatc
gatttcagcgatcttggcgatcaccgtatttttgctatttcaggaaatacgggagctggg
aaaacaacgatatttgatgcgatttgttatgtattatatggggaagcgagcggagaagaa
cgtagtgatacgagtatgctacgtagccaatttgctgatgataatatatacacaagtgta
gaattaaccttccgtttgaaaggaaagcaatacgaaataaaaagacagctcggtcataaa
aaacaagggaataaaacagttacagggcatgctgttgagctatatgaagtaataggtgat
gagaaggttccatgtgtggatcgttttcatgtgacagatgtgaacaaaaaggttgaagat
ttaatcggacttagcaaacatcaatttagtcaaattgttatgcttccgcaaggagaattc
cgaaaactattaacgtctgaaacagaaaataaagaagaaattttacgtcgtatttttaaa
acagatcgttataaattaatgcgtgaattgttagatcaaaaacgtaaacagtggaaagac
gtcttacaagaaaagcaaaaagaaagagaactgtacttccgtaatgtttttaaattaccg
gttcgagatgattcattattagagacattagttcaacaggaacatgtaaatacgcaccaa
gtagtcgaagcgcttgaacaagaaaaaaattgctatgaggcggaagttgaacaattacaa
gcgcagcaaacattgcaaacgcagcaattaaaaaaagccgaagatcgttttcatacagct
aagtctattaatgaaaagttcaaagatttacagcaaaaacaagagaaacaagcagtttta
caagcaaatcgagaacaaatagaaacagaagaacaacgctttaaacttgctgaacaagcg
aaacgattattaccatttgaacaatggtatgaagaagcggtacagagtgaacaaaatgct
gaacaattattgaaacaaatatctgtaaaaaaagaaaagacggttaaggcgtttgaactt
gcttatgagaaatatgaagaattaaagggtaaagagtctgttcgtgaagaaggtaagaaa
actgtacaaagattagaagagttacagccaattattgcttcattagcagagaaaaaatca
aaattgcaacaggcagaacttcaaagtgggaaattgaaggaaggtattcagaagtttgag
aaacagctagaaggacagatttctcaaaaacaacaaattgccggagaattacaacagcta
gaggttgcacttgagcaatatgtagcaaaagtagaagagctaacaaatatgcgggaagat
gcaaaagtactaaagcaagcatatgacgtttggcaagaaaagcaaaaatatgaacaagaa
aaagaagttgcaaatcaaaagatggaggttgcagttaaagcatatgaagagatggagcat
cgttggttaaatgaacaagcaggaatgttagctcttcatcttcatgaaggtgaatcttgt
cctgtatgtggtagcatagatcatccaaagaaagctacagaacgtggagattccattgat
gaaaaacagctaaatgaactgcgcgaaaagaaaacagttgctgaaaaattacatgttcaa
gtagaagagaaatggaatttctacagattacaatatgagcaagtaatagatgaagtcgta
aaacgaggataccgttcagaagagttagttgaaacataccgtacgctagtgcaaaacgga
aaacaactagcagctgaggtaaacacattaaaggaaagtgaagaaaaacgtaaacagcta
gcgttaagtgtaaaaggattagaagaaaaagtagaagaattacagaagcaaaaacgcgaa
gctgaagtgatgcagcatcgtactgaaatggagtgcatgcaacttcgtacgtcctatgaa
catgatcagcaaaaaacccatgaggacttacaaacgttagaagcctggaaaaaacaattt
gatcaagctgttagcacacttcgctttatggaagaggagtggaagaaagtacaagaagct
tatcaatattggcaaaatgaaaatatacgcatacaagctgagtacgatggtgctctaaag
caagtaagtcatgcaaaagaaaagcaagaagagactttacttcgctttacgacagagctt
gaacaaggtggatttatcgaccaacaagcttataaagaagcaaaattaacagatgtagaa
atgaagcatttgcatgagaaaattcaagagtactattcatccttagaagtattggctaaa
caaattgaggaactagtaaatgaattaagcgggaaagaatggacggacattacagctcta
gaagaacaaatgaaagagttaggaattcagcttgatattacaaaagaaaagcgccagcgt
gcccaaagtgcagttgcatacattaccgatttgcatgaaaacattagacgaattgatgaa
caaattcatgaagaagaaaaagctttccaagaacttgttgatttatatgaagtcatgaaa
ggggataacgaaagtcgtatttcgtttgaacgttacattttaattgagtatttagaacaa
attgttcaaattgctaacgaaagacttcgtaaactatcaaacggccagttctatttaaaa
cgaagtgaaagagttgaaaaacgaaatcgtcaaagtggactaggattagatgtatatgac
gcatatacaggtcaaacacgtgacgtaaaaacattgtctggcggggaaaaatttaatgca
tcgctttgtctagcacttggtatggcagatgtgatccaggcatatgaaggcggtatttct
atcgaaaccatgtttatcgatgaaggatttggctcgctagatgaagagtcattaacaaaa
gcgatcgatgcattgattgatttacaaaaatcaggacgatttattggcgttatttcacac
gttcaagagttgaaaaacgcaatgccagcagttttagaggtaacgaagcagaagaatggt
tgtagtgagactcggtttgtggtgaaataa
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