Bacillus pseudomycoides 219298: DJ92_821
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Entry
DJ92_821 CDS
T03239
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
bmyc
Bacillus pseudomycoides 219298
Pathway
bmyc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bmyc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DJ92_821 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bmyc03019
]
DJ92_821 (rny)
Messenger RNA biogenesis [BR:
bmyc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
DJ92_821 (rny)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
KH_2
DUF2844
UPF0242
Motif
Other DBs
NCBI-ProteinID:
AIK38064
UniProt:
A0A1S9WXK0
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Position
complement(788735..790303)
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AA seq
522 aa
AA seq
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MSSSTLIWILISILLATVGAVVGFFVRKSIAEAKINGAANEARRILEDANREAEALKKEA
LLEAKDEIHTLRTEAELEIRDRRSELQKQENRLMQKEENLDRKDETLDKREQMLEKKEES
LVARQQQIEELESKVGELVQKQQTELERISNLTREQAKAIILGKVESEISHEIAVMVKES
EVRAKEEADKKAKEILSLAMQRCAADHVAETTVSVVNLPNDEMKGRIIGREGRNIRTLET
LTGIDLIIDDTPEAVILSGFDPIRRETARIALDKLVQDGRIHPARIEEMVEKSRREVDEY
IREVGEQTTFEVGVHGLHPDLIKILGRLKYRTSYGQNVLKHSMEVAYLTGLMAAELGEDE
KLARRAGLLHDIGKAIDHEVEGSHVEIGVELATKYKEHPVVINSIASHHGDTEPTSIIAV
LVAAADALSAARPGARSETLENYIRRLEKLEEISESYEGVEKSFAIQAGREVRILVKPDT
IDDLEAHRLARDIRKRIENELDYPGHIKVTVIRETRAVEYAK
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgagtagtagtacattaatttggatactcatctccattttgcttgcaacagtcggtgca
gttgttggcttttttgttcgaaagtctattgcagaagcgaagattaatggtgcagcaaac
gaagcgagacgcattttagaagatgcaaatcgtgaagcagaggcacttaagaaggaagcg
cttttagaagcaaaggatgaaattcatacacttcgtacagaagctgaattagaaattcgt
gatcgtagaagcgaattacaaaaacaagaaaatcgtttaatgcaaaaagaagagaacctt
gatcgtaaagacgagacgctcgataaacgtgagcagatgttagaaaagaaagaggaatct
cttgtagcgagacaacaacagattgaagagttggaaagcaaagtgggagagttagttcaa
aagcaacaaacggaattagagcgcatttccaatctgacacgcgaacaagcgaaagcaatc
attttagggaaagtggaaagtgaaatttctcatgaaattgccgttatggtaaaagaaagt
gaagttcgtgcgaaagaagaggcggataagaaagcaaaagagattttatctcttgcaatg
caaagatgtgcagctgatcatgttgctgaaacaaccgtttcggttgtaaatcttccaaat
gacgaaatgaagggacgtattatcgggcgtgaaggtcgtaatattcgtacgttagaaacg
ttaacaggtattgaccttattattgatgatacgccagaagcggtaatcctatcagggttc
gatccaattcgtcgtgaaacagctcgtatcgctcttgataagctcgtacaggatggacgt
attcacccagcacgtattgaggaaatggtcgaaaaatcgagacgtgaagtggatgagtat
attcgcgaagttggggaacaaacaacatttgaagtaggtgtccacggattacatccagat
ttaattaaaatcttaggtcgtttgaaataccgtacaagttatggacaaaatgtgttgaaa
cactctatggaagtagcgtacttaacaggacttatggcagcggagcttggcgaggatgaa
aaactagcaagacgtgcaggtctattgcatgatatcggaaaagcaattgaccatgaagta
gaaggtagtcacgttgaaattggtgttgaactcgcaacgaaatataaagagcatccggtt
gttattaatagtatcgcatctcaccatggtgatacagaaccaacttccatcattgcagtt
ttagttgcagcagcggatgcgttatcagctgcaagaccaggagctcgtagtgaaacgctt
gaaaactatattcgtcgtcttgaaaagttagaagagatttcagaatcctatgaaggagta
gaaaaatcttttgcaattcaagcaggacgtgaagttcgcatcttggtaaaaccggataca
atcgatgatttagaagcccatcgtttagcgcgtgatattcgaaaacgtattgaaaatgaa
ctggattatccaggacatattaaagtaacagttattcgtgaaacacgtgcagtggaatac
gcaaaataa
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