Bacillus pseudomycoides 219298: DJ92_920
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Entry
DJ92_920 CDS
T03239
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
bmyc
Bacillus pseudomycoides 219298
Brite
KEGG Orthology (KO) [BR:
bmyc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bmyc03032
]
DJ92_920 (topA)
03400 DNA repair and recombination proteins [BR:
bmyc03400
]
DJ92_920 (topA)
Enzymes [BR:
bmyc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
DJ92_920 (topA)
DNA replication proteins [BR:
bmyc03032
]
Prokaryotic type
DNA Topoisomerases
DJ92_920 (topA)
DNA repair and recombination proteins [BR:
bmyc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
DJ92_920 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
Zn_ribbon_RPB9
SAND
Toprim_3
Toprim_2
zf_Rg
Motif
Other DBs
NCBI-ProteinID:
AIK36888
LinkDB
All DBs
Position
complement(876420..878498)
Genome browser
AA seq
692 aa
AA seq
DB search
MSDYLVIVESPSKAKTIEKYLGKKYKVVASMGHVRDLPKSQMGIEVKNNFTPKYITIRGK
GPVLKDLKSAAKKAKKVYLAADPDREGEAIAWHLANTLNVDVESDCRVVFNEITKDAIKE
SFKHPRAINMDLVDAQQARRILDRLVGYNISPLLWKKVKKGLSAGRVQSVAVRLIIDREK
EIQSFIPEEFWTIKTEFVKGKDTFEASFYGVNGEKVQLTNEAQVKDIIETMKNNAFSVEN
VTKKERKRNPALPFTTSSLQQEAARKLNMRAKKTMMLAQQLYEGIDIGKQGTVGLITYMR
TDSTRISETAQEEARSYITEAFGSEYIGTEKKKETKKANAQDAHEAIRPTSVMRKPEELK
SFLSRDQHRLYKLIWERFVASQMASAVMDTVTARLINNNVQFRASGSVVKFSGFMKVYVE
SKDDGAEEKDKMLPPLEIGETVFSKDMDPKQHFTQPPPRYTEARLVRMLEELGIGRPSTY
VPTLETIQKRGYVALDNKRFVPTELGEIVIELILEFFPEIINIEFTANMEQNLDEVEEGK
ANWVKIVDDFYVGFEPRLEKAEKEMREVEIKDEPAGEDCELCGHPMVFKMGKYGKFMACS
NFPDCRNTKPIVKEIGVTCPKCDKGQIIERRSNKKKRLFYGCGTYPECDFVSWDKPIGRK
CPKCEGMLVEKKLKKGVQVQCISCDYEEEQQM
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atgtcagattacctcgtaatcgtggagtcgccttctaaggcgaaaaccattgagaaatat
ttagggaaaaaatacaaagtcgtcgcgtctatgggacatgttcgcgatttgcctaaaagt
caaatggggatagaagtaaaaaataatttcaccccgaagtatattaccatccgtggtaaa
ggtcctgttttaaaagatttaaaatcagcagcaaaaaaagcaaaaaaagtctatctcgcg
gccgatccagaccgcgaaggagaagcgatcgcttggcatttagcgaatacgctaaatgtg
gatgttgaatcagattgccgggttgtatttaatgaaattacaaaagatgcgattaaagag
tcatttaagcatcctcgtgcaattaatatggatttagtagatgcacagcaagcaagacgg
atacttgatcgccttgttggttataatattagtcctttattatggaagaaagtcaaaaag
ggattaagtgcaggacgtgtacaatctgtagcggttcgcttaattattgatcgtgaaaaa
gaaattcaaagttttattccggaagagttctggacaattaaaacagaatttgtcaaagga
aaagacacatttgaagcatctttttatggtgtgaatggagaaaaggttcaattaacaaat
gaagcgcaagtaaaagacataattgaaacaatgaaaaacaatgcgttttcagttgaaaat
gtaacgaaaaaagagcggaaacgtaatcctgcattaccatttacaacgtcttctttacaa
caagaagctgcacgtaaattaaatatgcgagcaaagaagacaatgatgcttgcgcagcag
ctatacgaagggatagatattggtaaacagggaaccgtaggtcttattacgtatatgaga
acagactcaacgcgtatatcggaaactgctcaagaggaagctcgctcttatattactgag
gcgtttggttcagaatacatagggacagagaagaagaaggaaacgaaaaaagcgaatgca
caagatgcgcatgaagcaattcgtccaacttcggtaatgaggaagccagaggaactaaaa
agtttcttaagtcgtgatcaacatcgtttgtacaaattgatttgggagcgatttgttgca
agtcaaatggcatctgctgtaatggatactgttacagctagactcattaataataacgtt
caattccgtgcaagtggctcagtagtgaaattttcagggtttatgaaagtttacgtagaa
tcgaaagatgatggtgcggaagaaaaagataaaatgttgcctcctttagaaataggagaa
actgtattttcaaaagatatggatccaaagcagcactttacgcagcccccaccacgttat
acagaggcccgtttagttaggatgcttgaagagcttggaatcgggagaccgtctacttac
gtaccaacacttgaaacgattcagaagcgaggatatgttgcattagacaataaacgcttt
gttccgactgaacttggagaaattgtaattgaacttattttagagtttttcccagaaatt
attaacattgaatttacggccaatatggagcaaaaccttgatgaagtagaagaggggaaa
gcaaattgggtgaaaattgttgatgatttctacgtaggctttgaaccccgcttagaaaaa
gcggaaaaggagatgcgtgaagtcgaaattaaagatgaacctgctggggaagattgtgaa
ttatgcggtcacccaatggtctttaaaatgggcaaatacgggaagtttatggcttgttct
aatttccctgattgtcgcaatacaaaaccgattgtgaaagaaatcggtgtaacttgtccg
aaatgtgataaaggacaaattattgaacgccgaagtaataaaaagaaacgtcttttctat
ggatgtggcacatatccagaatgtgactttgtatcttgggataaaccgattggccggaaa
tgcccgaaatgtgaaggtatgctcgtagagaagaagctgaaaaaaggcgttcaagtacaa
tgtatttcttgtgattatgaagaagaacaacaaatgtga
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