Bacillus mycoides ATCC 6462: BG05_1618
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Entry
BG05_1618 CDS
T03798
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
bmyo
Bacillus mycoides ATCC 6462
Pathway
bmyo03410
Base excision repair
bmyo03430
Mismatch repair
bmyo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bmyo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BG05_1618 (recJ)
03430 Mismatch repair
BG05_1618 (recJ)
03440 Homologous recombination
BG05_1618 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bmyo03400
]
BG05_1618 (recJ)
DNA repair and recombination proteins [BR:
bmyo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
BG05_1618 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
BG05_1618 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
BG05_1618 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ssDNA-exonuc_C
RecJ_OB
DHH
DHHA1
PhoU
Motif
Other DBs
NCBI-ProteinID:
AJH20874
LinkDB
All DBs
Position
1543560..1545881
Genome browser
AA seq
773 aa
AA seq
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MLQPKTRWKEKEYNEELVSELANKLQLSPLVTSLFLGRGLNTEDKIADFLNTADQEFHDP
FLLEGMDRTVERVKKAIENGEQILIFGDYDADGVSSTTVLYLALKELGAEVEFYIPNRFT
EGYGPNEEAFRWAHSAGFSLIITVDTGIAAVHEAKVAKELGIDLIITDHHEPPPELPEAL
AIIHPKLEGGVYPFHYLAGVGVAFKVAHALLGRVPEHLLEIAVIGTVADLVSLHGENRLL
VQRGLKHMRMTRNIGLKALFKVANVSQSEITEESIGFALAPRINAVGRLEDATPAVHLLL
SEDPEEAKELAEEIDELNKLRKDIVKQITEEAIAEVENNFPPEENKVLVLAKEGWNPGVI
GIVASKLVERFYRPTIVLSIDPHKETAKGSARSIAGFDLFANLSDCRELLPHFGGHPMAA
GMTLNMNDVDELRRRLNEQADVILTAEDFIPITAVDAFCKVEDVTLAAIEDMQKLAPFGV
GNPKPRIAVKDAELESIRAIGSDGSHLKMALRDGQATLDTIGFGFGTYAKEISPVAKVSV
VGEVSINEWNNFKKPQLMVQDIAVEAWQLFDWRSMRNVEANLAELPKEKITLVYFSEEVL
NKFSLEGYKEQLVHASEVAHFDDQYIVLLDLPKGTDELGDVFKAGFPARIYTLFYQENNH
LFSTVPTREHFKWYYSFLSQKTPFSLRQYGEQLCRHKGWSKDTVNFMTQVFFELEFVTIK
DGVIFMADKKQKRDLIESNTYREKMNHLQLEKELVYSTYQQLYTWFETIRDHK
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
gtgttacaaccgaagacgcgttggaaagaaaaagaatataatgaggaactagtgagtgaa
ttagcaaataaattgcaactatcacctcttgtgacttcattatttcttggcagaggctta
aatacagaagataagattgcagactttttaaatacagcagatcaagaatttcatgatcca
tttttacttgaaggaatggatcggactgtagaacgtgtgaaaaaagctattgaaaatgga
gaacaaatattaatatttggcgattacgatgcggacggagtaagtagtacgactgtgtta
tatcttgctctcaaagaattaggtgcagaagtagagttttatattccaaatcgttttact
gaaggctatgggccaaatgaagaagcgtttcgttgggcgcacagtgcagggttctcacta
attattactgtcgatactggtatcgcagcggtacatgaagcgaaggtagcgaaggaactt
ggaatagatcttattattacagatcatcatgagccaccaccagaattaccagaggcactt
gcgattattcacccgaaattagaaggcggtgtttatccgtttcattatttagcgggtgtt
ggtgttgcatttaaagttgcacatgcacttttgggccgtgtgccagagcatttgttggaa
attgcagtaatcggtacggtagccgatttagtatcgcttcatggtgaaaatagattgtta
gtacagcgtggactgaagcatatgcgaatgactcggaatatcggtttaaaggcgttattt
aaagttgctaacgtttcgcaaagcgaaattacagaagaaagcatcgggttcgcactcgca
cctcgtattaatgcagttggtcgtttggaagatgcaacacctgctgtacaccttttatta
tcagaagatccagaggaagcgaaagagctagctgaagaaattgatgagctgaacaaactt
cgaaaagatattgtaaagcaaattactgaagaagctatcgctgaagtcgaaaataatttc
ccgccagaagaaaataaagtattagtccttgcaaaagaaggttggaatccaggggtaatt
ggaattgtcgcttctaagttagttgaacgtttttatcgtccaacgattgtattaagcatt
gatcctcataaagaaacagcaaagggatcggctcgtagtattgcaggatttgatttgttt
gcaaacctttcagattgccgtgaattgttaccgcatttcggaggtcatccgatggcagcg
ggaatgacgcttaatatgaatgatgtggatgaattaagacgcaggttaaatgagcaagca
gatgtaattttaacagcagaagattttattccgattacagcagtggatgcattttgtaaa
gtagaggatgtaacgcttgccgcgattgaggatatgcaaaagttagcgccatttggcgta
ggaaatccgaaaccgcgtattgcggtgaaagatgccgaattagaaagtatccgtgcaatt
ggatctgatggttcgcatttaaaaatggctcttcgtgatggacaagcaacactggacacg
attggatttggatttggtacttatgcgaaagaaatctctccagttgcgaaggtttctgta
gtaggagaagtgtccattaatgaatggaataactttaaaaagccgcaattaatggtgcaa
gatattgctgtagaggcatggcaattatttgactggcgtagtatgcgtaatgtagaagca
aatttagcagaacttccgaaagaaaaaataacattggtgtatttttctgaagaggtattg
aataaattttctttagaaggctataaagaacagctcgtgcatgcatcagaggtagctcat
tttgatgatcaatacattgtgctacttgatttgccgaaaggaacagatgaattaggtgat
gtatttaaggctggattcccagctcgaatttacacgctattttatcaagagaataatcat
ttatttagtacggtcccaacgagggaacattttaaatggtactattctttcttaagccaa
aaaacaccattttctttaaggcaatatggggaacaactgtgtcgtcataaaggttggtca
aaagatacagtaaatttcatgacacaggtgttttttgagttagaatttgttacaataaaa
gacggtgtcatttttatggcagacaaaaaacaaaagcgtgatttaattgaatcgaacaca
tatcgtgagaaaatgaaccacttacaattagagaaagaattggtttatagcacatatcag
caactatatacatggtttgaaacgattcgtgatcataaataa
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