Bacillus mycoides ATCC 6462: BG05_1697
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Entry
BG05_1697 CDS
T03798
Symbol
holA
Name
(GenBank) DNA polymerase III, delta subunit
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
bmyo
Bacillus mycoides ATCC 6462
Pathway
bmyo03030
DNA replication
bmyo03430
Mismatch repair
bmyo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bmyo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BG05_1697 (holA)
03430 Mismatch repair
BG05_1697 (holA)
03440 Homologous recombination
BG05_1697 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bmyo03032
]
BG05_1697 (holA)
03400 DNA repair and recombination proteins [BR:
bmyo03400
]
BG05_1697 (holA)
Enzymes [BR:
bmyo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BG05_1697 (holA)
DNA replication proteins [BR:
bmyo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BG05_1697 (holA)
DNA repair and recombination proteins [BR:
bmyo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BG05_1697 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
HP_1247_M
SH3_Tf2-1
Motif
Other DBs
NCBI-ProteinID:
AJH18430
UniProt:
A0A084J2T7
LinkDB
All DBs
Position
1620546..1621556
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AA seq
336 aa
AA seq
DB search
MSDIHKKIKKKQFAPLYVLYGTEAYFINETIKLITTEALEEEDREFNVVTYDLEEAYLED
VVEDAHTLPFFGERKVILIKSPLFLTAQKEKLEQNIKILEEYIGEPSPFSILVFVAPYEK
LDERKKITKLLKKTADVIEANAMQVQDVQKWIVSRADEVHVHIDNAAVSLLLELVGSNVT
MLAKEMDKLTLYVGMGGEITPKLVTELVPKSVEQNVFALTEKVVKKDIAGAMQILDGLFT
QQEEPIKLLALLVSQFRLLHQVKELQQRGYGQNQIASHIGVHPYRVKLAMNQTKFFSFEE
LKKVIIELAEADYSMKTGKMDKKLVLEFFLMRLNHM
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatatacataagaagattaaaaagaaacagttcgctccgttgtatgtactgtat
ggaacggaagcttattttataaatgaaacgataaagcttattacaacggaagcgcttgaa
gaggaagatcgagagtttaatgttgtgacatacgatttggaagaagcgtatttagaagat
gtagttgaggatgcgcatacgcttcctttttttggagagcgtaaagttatattaataaaa
tcaccactatttttaacggcacaaaaagaaaaattagaacaaaatataaaaattttagaa
gaatatattggggagccatctcctttttctattcttgtttttgttgcgccttatgaaaaa
ttagacgaacgaaaaaaaattacaaaactattaaagaaaacagcggatgtaatagaagca
aatgcgatgcaagtgcaggatgttcagaagtggattgtttctcgtgcggatgaggtgcat
gtgcatattgataatgcagctgttagtttattgttagagcttgtgggaagtaatgtaaca
atgttggcgaaggaaatggacaagttaacgttatacgtcggtatgggcggagaaattacg
ccaaaacttgtcacggaacttgtgccgaaatctgttgagcaaaacgtgtttgctttaaca
gaaaaagtggtgaaaaaagatatcgctggtgcgatgcaaattttagacggattatttaca
cagcaggaagaaccgattaaactgctcgctttattagtaagtcagttccgcttgctgcat
caagtgaaagagttgcaacagcgtggttacggacaaaatcaaatcgcgtcccatattggt
gtacatccgtaccgggtaaagttggcgatgaatcaaacgaagtttttctcttttgaagaa
ttaaaaaaagttattatagaattggcggaagctgattatagtatgaagactggaaagatg
gataagaaacttgtgcttgagtttttcttaatgcggttaaatcatatgtag
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