Bacillus mycoides ATCC 6462: BG05_2226
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Entry
BG05_2226 CDS
T03798
Symbol
rnjB
Name
(GenBank) ribonuclease J 2
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
bmyo
Bacillus mycoides ATCC 6462
Pathway
bmyo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bmyo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BG05_2226 (rnjB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bmyo03019
]
BG05_2226 (rnjB)
Messenger RNA biogenesis [BR:
bmyo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BG05_2226 (rnjB)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
RMMBL
Lactamase_B_2
Anti-Pycsar_Apyc1
PDEase_II
Motif
Other DBs
NCBI-ProteinID:
AJH17642
UniProt:
A0A0B5S4Z8
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All DBs
Position
2114756..2116426
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AA seq
556 aa
AA seq
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MKRKENESVKVFALGGVGEIGKNMYCVEIDSEIFIVDAGLMFPGDEMFGIDIVIPDITYL
VENQERVKGLFITHGHEDHIGGIVYVLRKLSIPVYATKLTVGLIQEKLGEAGMLGRVDLK
TIDSNSTVEFNSTNVSFFGTTHSIPDSVGVCFHTSKGAVVYTGDFKFDQTPIGNSGADLG
KMAQIGNEGVLCLLSDSTNAERPGYTGSEKEVGIEISKVFYSSEGRIIVASFASNVHRIQ
QVFDAAAETGRKVAVVGRSMVKVVDIARRLGYLDVPEGMVISLQEIDNFPEKKVAILTTG
SQGEPMAALSRMAKQAHKQISIRKGDTVIIAASPIPGNEVSVSKIIDLLFRSGAEVIYYG
ERKVHVSGHGSQEELKLMINLMKPKYFVPVHGEFRMQKAHAYLAEDVGVARENIFIVEKG
DVIAFGDDEAKLAGKVQAGNVLIDGLGVGDVGNIVLRDRKMLSQDGILVVVVTLGKDEKK
IISGPEIISRGFVYVRESEALIERSTDIVRMIVEQSIKEYTIEWSMLKQNIRELLGQFLY
EETKRKPMILPIIMEV
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgaagagaaaagagaatgagtctgttaaagtatttgctcttggcggagtaggtgaaatc
ggaaaaaacatgtactgtgttgaaattgattctgaaatctttattgtagatgccggattg
atgttcccgggagatgaaatgtttgggattgatattgttattcctgacattacatattta
gtagaaaatcaagagcgagtaaaaggactatttattacccatggtcatgaagatcatatt
ggtggaattgtttatgtgcttcgtaaattatctattccagtatatgcgacgaaattaacg
gtaggacttatacaagaaaagcttggcgaagcaggaatgttaggccgtgtagacttaaaa
acaattgactcgaattcaacagtagagtttaattcaacaaatgtgtcattcttcggaacg
acacatagtattccggattctgtgggtgtttgtttccatacatcaaaaggtgctgtagta
tatacaggagactttaaatttgatcaaactccaatcggaaatagtggagcagatcttggg
aaaatggcgcaaattggaaatgaaggcgtactttgcttgttatctgatagtacaaacgct
gaacgtcctggttatacaggttcggaaaaagaagttggtatagagatttctaaagtattc
tatagttcagaagggcgtattattgttgcttcatttgcctccaatgtacaccgtattcaa
caagtgtttgatgcagctgctgaaactggaaggaaagtagcggtagtaggacgtagcatg
gtgaaagtggtagatattgcaagacgtcttggttatttagatgttccagaaggtatggtt
atttcattacaagaaatagacaatttcccggaaaaaaaggtagccatcttaacgactggt
agtcaaggggaaccgatggcagccctttctagaatggcgaaacaagctcataaacaaatt
tcaattcgtaaaggtgatactgttattattgcagcttctccaattccaggaaatgaagta
tctgtatcaaaaattattgacttgttatttagatctggtgctgaggttatttattacggt
gaaagaaaagttcacgtttcaggtcatggtagccaagaagagttaaagctgatgataaat
ttaatgaagccgaagtattttgtacccgtacatggtgagttccgtatgcaaaaagcacat
gcgtatttagcggaagatgtaggtgttgcgagagagaatatctttatcgtagaaaaaggc
gatgtaattgcttttggtgacgatgaagcaaaattagctggtaaagtgcaagctggtaat
gttttaattgatggattaggtgtaggtgacgtcggtaacatcgttcttcgagatagaaag
atgttatctcaagatggaattttagttgttgttgtaacacttggtaaggatgaaaagaaa
ataatctctggtccagaaattatttcacgcggctttgtatatgttcgtgaatcagaagca
ttaatcgaacgatccacagatattgtacgtatgattgttgaacaatcaattaaagaatat
acaattgaatggtctatgttgaaacaaaatattcgtgaattattagggcagttcttgtac
gaagaaacgaagagaaagccaatgattttaccgattattatggaagtataa
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