KEGG   Bacillus mycoides ATCC 6462: BG05_2226
Entry
BG05_2226         CDS       T03798                                 
Symbol
rnjB
Name
(GenBank) ribonuclease J 2
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
bmyo  Bacillus mycoides ATCC 6462
Pathway
bmyo03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bmyo00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BG05_2226 (rnjB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bmyo03019]
    BG05_2226 (rnjB)
Messenger RNA biogenesis [BR:bmyo03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     BG05_2226 (rnjB)
SSDB
Motif
Pfam: RNase_J_b_CASP RNase_J_C Lactamase_B RMMBL Lactamase_B_2 Anti-Pycsar_Apyc1 PDEase_II
Other DBs
NCBI-ProteinID: AJH17642
UniProt: A0A0B5S4Z8
LinkDB
Position
2114756..2116426
AA seq 556 aa
MKRKENESVKVFALGGVGEIGKNMYCVEIDSEIFIVDAGLMFPGDEMFGIDIVIPDITYL
VENQERVKGLFITHGHEDHIGGIVYVLRKLSIPVYATKLTVGLIQEKLGEAGMLGRVDLK
TIDSNSTVEFNSTNVSFFGTTHSIPDSVGVCFHTSKGAVVYTGDFKFDQTPIGNSGADLG
KMAQIGNEGVLCLLSDSTNAERPGYTGSEKEVGIEISKVFYSSEGRIIVASFASNVHRIQ
QVFDAAAETGRKVAVVGRSMVKVVDIARRLGYLDVPEGMVISLQEIDNFPEKKVAILTTG
SQGEPMAALSRMAKQAHKQISIRKGDTVIIAASPIPGNEVSVSKIIDLLFRSGAEVIYYG
ERKVHVSGHGSQEELKLMINLMKPKYFVPVHGEFRMQKAHAYLAEDVGVARENIFIVEKG
DVIAFGDDEAKLAGKVQAGNVLIDGLGVGDVGNIVLRDRKMLSQDGILVVVVTLGKDEKK
IISGPEIISRGFVYVRESEALIERSTDIVRMIVEQSIKEYTIEWSMLKQNIRELLGQFLY
EETKRKPMILPIIMEV
NT seq 1671 nt   +upstreamnt  +downstreamnt
atgaagagaaaagagaatgagtctgttaaagtatttgctcttggcggagtaggtgaaatc
ggaaaaaacatgtactgtgttgaaattgattctgaaatctttattgtagatgccggattg
atgttcccgggagatgaaatgtttgggattgatattgttattcctgacattacatattta
gtagaaaatcaagagcgagtaaaaggactatttattacccatggtcatgaagatcatatt
ggtggaattgtttatgtgcttcgtaaattatctattccagtatatgcgacgaaattaacg
gtaggacttatacaagaaaagcttggcgaagcaggaatgttaggccgtgtagacttaaaa
acaattgactcgaattcaacagtagagtttaattcaacaaatgtgtcattcttcggaacg
acacatagtattccggattctgtgggtgtttgtttccatacatcaaaaggtgctgtagta
tatacaggagactttaaatttgatcaaactccaatcggaaatagtggagcagatcttggg
aaaatggcgcaaattggaaatgaaggcgtactttgcttgttatctgatagtacaaacgct
gaacgtcctggttatacaggttcggaaaaagaagttggtatagagatttctaaagtattc
tatagttcagaagggcgtattattgttgcttcatttgcctccaatgtacaccgtattcaa
caagtgtttgatgcagctgctgaaactggaaggaaagtagcggtagtaggacgtagcatg
gtgaaagtggtagatattgcaagacgtcttggttatttagatgttccagaaggtatggtt
atttcattacaagaaatagacaatttcccggaaaaaaaggtagccatcttaacgactggt
agtcaaggggaaccgatggcagccctttctagaatggcgaaacaagctcataaacaaatt
tcaattcgtaaaggtgatactgttattattgcagcttctccaattccaggaaatgaagta
tctgtatcaaaaattattgacttgttatttagatctggtgctgaggttatttattacggt
gaaagaaaagttcacgtttcaggtcatggtagccaagaagagttaaagctgatgataaat
ttaatgaagccgaagtattttgtacccgtacatggtgagttccgtatgcaaaaagcacat
gcgtatttagcggaagatgtaggtgttgcgagagagaatatctttatcgtagaaaaaggc
gatgtaattgcttttggtgacgatgaagcaaaattagctggtaaagtgcaagctggtaat
gttttaattgatggattaggtgtaggtgacgtcggtaacatcgttcttcgagatagaaag
atgttatctcaagatggaattttagttgttgttgtaacacttggtaaggatgaaaagaaa
ataatctctggtccagaaattatttcacgcggctttgtatatgttcgtgaatcagaagca
ttaatcgaacgatccacagatattgtacgtatgattgttgaacaatcaattaaagaatat
acaattgaatggtctatgttgaaacaaaatattcgtgaattattagggcagttcttgtac
gaagaaacgaagagaaagccaatgattttaccgattattatggaagtataa

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