Bacillus mycoides ATCC 6462: BG05_2245
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Entry
BG05_2245 CDS
T03798
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
bmyo
Bacillus mycoides ATCC 6462
Pathway
bmyo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bmyo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BG05_2245 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bmyo03019
]
BG05_2245 (rny)
Messenger RNA biogenesis [BR:
bmyo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BG05_2245 (rny)
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Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
Golgin_A5
KH_KhpA-B
KH_2
DUF2844
DUF4407
Motif
Other DBs
NCBI-ProteinID:
AJH22178
UniProt:
A0A084J4A9
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Position
2135517..2137082
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AA seq
521 aa
AA seq
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MSSSTVWILISILLATVGAVVGFFVRKSIAEAKINGAANEAKRILDEANRDAEALKKEAL
LEAKDEIHTLRTEAELEIRDRRSELQKQENRLMQKEENLDRKDETLDNRERQLEKKEESL
VAKQQQIEELESKVGELVQKQQTELERISNLTREQAKAIILGKVESEVSHEIAVMVKESE
VRAKEEADKKAKEILSLAMQRCAADHVAETTVSVVNLPNDEMKGRIIGREGRNIRTLETL
TGIDLIIDDTPEAVILSGFDPIRRETARIALDKLVQDGRIHPARIEEMVEKSRREVDEYI
REVGEQTTFEVGVHGLHPDLIKILGRLKYRTSYGQNVLKHSMEVAYLTGLMAAELGEDEK
LARRAGLLHDIGKAIDHEVEGSHVEIGVELATKYKEHPVVINSIASHHGDTEPTSIIAVL
VAAADALSAARPGARSETLENYIRRLEKLEEISESYEGVEKSFAIQAGREVRILVKPDTI
DDLEAHRLARDIRKRIENELDYPGHIKVTVIRETRAVEYAK
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgagtagtagtacagtttggatactcatctccattttgcttgcaacagtcggtgcagtt
gttggcttttttgttcgaaagtctattgctgaagcgaagattaatggtgcagctaatgaa
gcaaaacgtattctagacgaagcgaatcgtgatgctgaagcacttaagaaagaagcgctt
ttagaagcaaaggatgaaattcatacacttcgtacagaagctgaattagaaattcgtgac
cgtagaagcgaattacaaaaacaagaaaatcgtttaatgcaaaaagaagagaaccttgat
cgtaaagacgaaacgctcgataaccgcgagcgacagttagaaaagaaagaggaatctctt
gtagcgaaacaacaacagattgaagagttggaaagcaaagtgggagagttagttcaaaag
caacaaacagaattagagcgcatttccaatctgacccgcgaacaagcgaaagcaattatt
cttggtaaagtggaaagtgaagtttctcatgaaattgccgttatggtaaaagaaagtgaa
gttcgcgcgaaagaagaagcggataagaaggcaaaagagattttatctcttgcaatgcaa
agatgtgcagctgatcatgttgctgaaacaaccgtttcggttgtaaatcttccaaatgac
gaaatgaagggacgtattatcggacgtgaaggtcgtaacattcgtacgttagaaacgtta
acaggtattgaccttattatcgatgatacaccagaagctgtaattctatcaggatttgac
ccgattcgtcgtgaaacagctcgtatcgctcttgataaactagtacaggacggacgtatt
cacccagcgcgtattgaagagatggtcgaaaaatcaagacgtgaagtggacgagtatatt
cgtgaagtcggagagcaaacaacgtttgaagtgggtgttcatggcttacatccagattta
attaaaattttaggtcgtttaaaataccgtacaagttacggacaaaacgtcttaaaacac
tctatggaagttgcatacttaactggacttatggcagcggagcttggtgaggatgaaaaa
ctagcaagacgtgctggtctattacatgatatcggaaaagcaatcgatcatgaagtagaa
ggtagccacgttgaaattggtgttgaactcgcaacgaaatataaagagcatcctgttgta
ataaacagtatcgcatctcaccatggtgacacagaaccaacttctatcattgcagttcta
gttgctgcagcagatgcattatcagctgcaagaccgggagctcgtagtgaaacgcttgag
aattacattcgtcgtcttgaaaagttagaagaaatttcagagtcttatgaaggcgtagaa
aaatctttcgcaattcaagcaggacgtgaagttcgtattctggtaaaaccagatacaatt
gatgatttagaagctcatcgtttagctcgtgatattcgaaaacgtattgaaaatgaactg
gattatccaggacatattaaagtaactgttattcgtgaaacacgtgcagtggaatacgca
aaataa
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