Bacillus mycoides ATCC 6462: BG05_241
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Entry
BG05_241 CDS
T03798
Symbol
cshA
Name
(GenBank) DEAD-box ATP-dependent RNA helicase CshA
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
bmyo
Bacillus mycoides ATCC 6462
Pathway
bmyo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bmyo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BG05_241 (cshA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bmyo03019
]
BG05_241 (cshA)
03009 Ribosome biogenesis [BR:
bmyo03009
]
BG05_241 (cshA)
Enzymes [BR:
bmyo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BG05_241 (cshA)
Messenger RNA biogenesis [BR:
bmyo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BG05_241 (cshA)
Ribosome biogenesis [BR:
bmyo03009
]
Prokaryotic type
rRNA helicases
BG05_241 (cshA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DeaD_dimer
ResIII
CMS1
NAT10_TcmA_helicase
DD_DDX21-DDX50
Motif
Other DBs
NCBI-ProteinID:
AJH19662
UniProt:
A0A0B5SAS6
LinkDB
All DBs
Position
complement(250870..252486)
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AA seq
538 aa
AA seq
DB search
MTTFRELGLSESLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPL
LDKVDTNKEAVQGIVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALKKH
PHIIVGTPGRILDHINRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPETHQTLL
FSATMPDPIRRIAERFMTEPQHIKVKAKEVTMPNIQQFYLEVQEKKKFDVLTRLLDIQSP
ELAIIFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKFKEGTIEVLVATDVA
ARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKKGIAMLFVTPRESGQLKNIERTTK
RKVDRMDAPTLDEALEGQQRLIAEKLQSTIENDNLSYYKRIAEEMLEENDSVTVVAAALK
MMTKEPDTTPIALTSEPPVVSRGGGGGSKKRGGNGSGYRDGNRNRSRDGRGGGDGRNRDR
NRDGRGSGSGDGRNRDRNRDGGSRDAGSRDGNRGRKGEGRPGSSNGRGERKHHSRPQA
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
ttgacaacatttcgagaactaggattaagtgagtctttactacaatctgttgaaagtatg
ggctttgaagaggctacgccgattcaagctgaaacaattccacatgcattgcaaggtaag
gatattattgggcaagcgcaaacaggtacagggaaaacagcagcattcggattaccacta
ttagataaagtggatacaaataaagaagcagttcaaggtattgttatcgcgccaacgcgt
gaattagcaattcaagttggagaagagctatacaaaattggtaaacataaacgtgttcgt
attctaccaatttatggtggtcaagatattaaccgccaaattcgtgctctaaaaaaacac
ccacacattattgtaggtacgccgggtcgtattttagatcatatcaaccgtaaaacactt
cgcttacaaaacgtagagactgttgttcttgacgaagcggatgaaatgttaaacatgggc
ttcattgaagatattgaagcgattttaacagatgtgccagaaacacatcaaacattatta
ttctcagcgacaatgccagatccaatccgtcgtattgctgagcgtttcatgactgagcct
caacacattaaagtaaaagcaaaagaagtaacaatgccaaacattcagcagttctattta
gaagtgcaagaaaagaaaaagtttgacgtgttaacacgcttactagatattcaatctcca
gagcttgcaatcatattcggtcgtacaaagcgtcgtgttgatgaattatcagaagcatta
aacttacgtggttatgcagcagaaggtattcacggtgacttaacacaagcgaagcgtatg
tctgtattacgtaaatttaaagaaggtactattgaagttcttgttgcaacagacgttgct
gcacgtggtcttgatatttcaggcgtaacacacgtatacaacttcgatatcccacaagat
ccagaatcatacgttcaccgtatcggtcgtactggccgtgccggtaaaaaaggtattgca
atgttatttgtaacaccacgtgaatcaggacaattaaaaaatatcgagcgtacaacaaaa
cgtaaagttgatcgtatggacgcaccgacacttgacgaggcgttagaaggtcaacaacgt
ttaatcgctgaaaaacttcaaagcacaattgaaaatgataacttatcatactacaagcgt
attgcagaagaaatgttagaagagaatgattctgtaacagtagtagctgctgctttaaaa
atgatgacaaaagagccggatacaactccgatcgctttaacatcagaaccaccagttgtt
tcaagaggtggcggtggcggttctaaaaaacgcggtggtaacggaagtggataccgtgat
ggtaaccgtaatcgtagtcgtgatggacgcggcggtggcgatggtcgtaaccgtgatcgc
aatcgtgatggacgtggaagcggaagtggcgatggtcgtaaccgtgatcgtaatcgtgat
ggcggtagccgtgatgctggtagccgtgatggcaaccgtggtcgtaaaggtgaaggtcgc
cctggatcttcaaatggacgcggcgaaagaaaacatcatagccgtccacaagcttaa
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