Bacillus mycoides ATCC 6462: BG05_2841
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Entry
BG05_2841 CDS
T03798
Name
(GenBank) tRNA-splicing ligase RtcB family protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
bmyo
Bacillus mycoides ATCC 6462
Brite
KEGG Orthology (KO) [BR:
bmyo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bmyo03016
]
BG05_2841
Enzymes [BR:
bmyo01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
BG05_2841
Transfer RNA biogenesis [BR:
bmyo03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
BG05_2841
Prokaryotic type
tRNA splicing ligases
BG05_2841
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RtcB
DUF6922
Amidase_3
SpoIISA_toxin
Ta0938
Motif
Other DBs
NCBI-ProteinID:
AJH21367
UniProt:
A0ABX6ZF39
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All DBs
Position
2711122..2712081
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AA seq
319 aa
AA seq
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MEVVMINKKKEEINFDHLDETIRQFVPSGFRIRDKEHRFSKMIDFDSVRAPFTLQRAQKS
IGTLGGGNHFVELNEDDKGNVFIVIHSGSRNLGKQIAEYYQNLAYEQLINVKSIKEEIIE
RLTKEGRQKEIHEAIRGIKKPTIRKELAYLEGQGSKDYMNDMKIAQKYAELNRKAMMDEI
VTRMDWKVIDQFTTIHNYIDMENMILRKGAISAQKDERVIIPINMRDGSIIALGKGNADW
NFSGPHGAGRIMSRKKAKELLNLEDFQNTMKSVWTTSVAESTLDEAPMVYKPIDEIVENT
KETIDIKHIIKPIYNFKAN
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atggaagttgttatgattaataagaagaaagaggaaatcaacttcgatcatttagacgaa
acgattcgtcaatttgtcccaagtggttttcgtattcgagataaggaacatagattttca
aaaatgattgattttgatagtgtaagagctccattcacattacaacgtgctcaaaagagt
attggtacgcttggtgggggaaatcattttgtcgaactgaatgaggatgataaggggaat
gtattcattgtcattcatagtggttctcgtaatttaggtaaacaaatagcagagtattat
caaaaccttgcttatgagcaacttatcaacgttaaatctattaaagaggaaatcattgaa
cgtttaacaaaagaaggcagacaaaaagaaatacatgaagctatacgcgggattaagaaa
ccgacgattcgcaaagagttagcttatttagaaggacaaggatctaaagattacatgaat
gatatgaaaatcgctcaaaaatatgcggagttaaatcgtaaagcaatgatggatgaaatc
gtcactagaatggattggaaagtaatagatcaattcactacaattcataactacatcgat
atggaaaatatgattttacgaaaaggtgctatttcagctcagaaagatgaacgagtaatc
attccaattaacatgagagacggttcaatcattgcattgggtaaaggaaatgcagattgg
aacttttctggaccacatggagcggggcgcattatgagccgtaagaaagctaaagaatta
cttaacttagaggattttcaaaatacaatgaaatcagtttggactacatctgttgcagaa
agtactttagatgaagctccaatggtatataagccaatagatgaaattgttgagaataca
aaagaaacaattgatatcaaacatattattaagccgatttacaattttaaggctaattaa
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