Bacillus mycoides ATCC 6462: BG05_671
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Entry
BG05_671 CDS
T03798
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
bmyo
Bacillus mycoides ATCC 6462
Pathway
bmyo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bmyo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BG05_671 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bmyo03021
]
BG05_671 (rho)
03019 Messenger RNA biogenesis [BR:
bmyo03019
]
BG05_671 (rho)
Transcription machinery [BR:
bmyo03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
BG05_671 (rho)
Messenger RNA biogenesis [BR:
bmyo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BG05_671 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
S1CSD-TOTE-2
AAA_25
ATPase_2
AAA
AAA_22
NACHT
Motif
Other DBs
NCBI-ProteinID:
AJH22152
UniProt:
A0A084IYQ7
LinkDB
All DBs
Position
657478..658749
Genome browser
AA seq
423 aa
AA seq
DB search
MNLSIAALENMKLKELYELAKEFKISYYSKLTKKELIFSILKARAEKEGFFFMEGVLEII
QSEGFGFLRPINYSPSSEDIYISASQIRRFDLRNGDKVSGKVRPPKENERYFGLLQVEAV
NGDDPDSAKERVHFPALTPLYPDRQMKLETETKKLPTRIMDLIAPVGFGQRGLIVAPPKA
GKTSLLKEIAHSVTTNHPEAELIVLLIDERPEEVTDIERSVKGDVVSSTFDEVPENHIKV
AELVLERAMRLVEHKRDVVILMDSITRLARAYNLVIPPSGRTLSGGIDPAAFHRPKRFFG
AARNIEEGGSLTILATALVDTGSRMDDVIYEEFKGTGNMELHLDRSLAERRIFPAIDIRR
SGTRKEDLLIPKEHLDKLWGIRKTMRDTPDFVEGFLRKLRQTKTNEEFLQNIVADSKRYV
TTK
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgaatttgtcaattgcagcattagaaaacatgaaattaaaagagttatacgagcttgcg
aaggaatttaagatttcgtattacagcaagttaacgaaaaaagagctaatcttctctatc
ttaaaagctcgagcagaaaaagaaggtttctttttcatggaaggcgtattagaaattatt
caatcagaaggatttggattcttacgtcctatcaattattctccaagctcagaagatatt
tatatctcggcttcgcaaattcgtcgtttcgatttacgtaatggagataaggtttctggt
aaagtacgacctccgaaagaaaatgagcgctattttggattgctacaagttgaagctgta
aatggagatgatccagactcagcaaaagagcgtgtacatttccctgcattaacaccgtta
tacccagatcgccaaatgaaattggagacggaaacgaaaaagttaccgacacgcatcatg
gatttaatcgcaccagttggatttggacaacgtggtttaattgttgcgcctccaaaggct
ggtaaaacaagtctgttaaaagaaattgcacacagtgtcacaacaaatcatccggaagca
gaattaattgtacttttaattgatgagcgtccagaggaagtaacagatattgaacgttct
gttaaaggtgatgttgtaagttctacttttgatgaagtgccagagaatcatattaaagta
gcggagcttgtattagagcgtgcaatgcgtcttgtagaacataaaagggacgttgtcatt
ttaatggatagtattacccgtttagcgcgtgcttacaaccttgttattccgccaagtggt
agaaccttatcgggtggtattgatcctgctgcttttcatagaccgaagcgtttctttggg
gctgcgcgtaatatcgaagagggcggtagcctaacgattttagcaacagcgcttgttgat
acagggtctcgtatggatgatgtaatttacgaggagtttaaaggaactggaaatatggaa
cttcacttagatcgctcattagctgagcgccgtatcttcccagcgattgatattcgtcgc
tctggtacgcgtaaagaagacctattaattccgaaagaacatttagacaagctgtggggt
attcgtaaaacaatgcgtgatacaccagactttgttgaaggcttcttacgtaaacttcgt
caaacaaagacaaatgaagaatttttacaaaacattgttgcagactcaaaaaggtatgta
accactaagtaa
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