Brassica napus (rape): 106345308
Help
Entry
106345308 CDS
T04128
Name
(RefSeq) E3 ubiquitin-protein ligase ATL15-like
KO
K10664
E3 ubiquitin-protein ligase ATL6/9/15/31/42/55 [EC:
2.3.2.27
]
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bna04121
]
106345308
Enzymes [BR:
bna01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
106345308
Ubiquitin system [BR:
bna04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
106345308
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_UBOX
zf-RING_5
zf-C3HC4_3
zf-RING_16
Rad50_zn_hook
Tmpp129
zf-Nse
zf-Vps39_C
Prok-RING_1
FANCL_C
Motif
Other DBs
NCBI-GeneID:
106345308
NCBI-ProteinID:
XP_013639983
LinkDB
All DBs
Position
C5:14287260..14289001
Genome browser
AA seq
376 aa
AA seq
DB search
MVMSRLCFYSSFLLLLRFVAAQSSSYEQGTGFNPTTAIVMIVLVSVFFSLGCVSVYMRRC
LEQALGVDDGRSGDPGNWLNVRQQTPRGLDASVIETFPTFRYSTVKTLRIGKEELECPVC
LNEFEDDETLRLLPQCCHVFHPGCIDAWLRSHATCPLCRANLVPVPGESVSFEISGLARE
SGQSCPLTSIVDDNRRMALASPDERLLDSVAWIGNQSMPRKSMSTGWKLAGLFSRSSSYS
QTEENLDRFTLRLPQEIHDQLVNQGSKGHIALPQVRSSIRGYRTGSLGNERNYFYFERFD
QDGRFDRRPFSITPPYRTGLIRSPSGVINGGDGYQERAGTPKSLLLAIRSPFDRLFAGKN
NVGERSYLRSGDASPV
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atggtgatgtcaagattatgcttctactcttctttcttgcttttgttacggttcgttgcc
gctcaaagcagcagctatgaacaaggaacagggttcaatccaaccacggctatagtcatg
atcgtactcgtcagcgttttcttctcacttggatgtgtctccgtctacatgagaaggtgt
ctcgagcaagccctaggggtcgacgacggaagatccggagacccgggaaactggcttaac
gttaggcagcagacgccgcgtggactcgacgcgtctgtcatagaaacttttccgacgttt
cgttactccaccgtgaagacgctgagaatcggcaaagaagagttggagtgtcccgtttgc
ctcaacgagttcgaggacgacgaaacgttgcgtttgcttcctcaatgttgccacgtgttc
catcctggttgcatagatgcctggctacgttctcacgccacgtgtcctctctgccgcgct
aatctcgttcctgtaccgggtgagtctgtttctttcgagatctccggtttagctagagaa
tccggtcagagctgtcctctaacgtcgattgttgatgataaccggagaatggctttggct
tctccggacgagcggttacttgactcagtggcttggataggtaaccaaagcatgccacgt
aagtccatgtctacagggtggaaactagctggattgtttagccggtcaagttcttacagt
cagaccgaggagaatctagaccggttcacgctaagattaccgcaggagatacatgatcag
ctcgtgaaccaagggtcaaaaggccacattgcgctgccccaagtgaggagctcgatacga
gggtacagaaccggaagcctaggcaatgaaagaaactatttctactttgaacggttcgat
caagacggtcggttcgaccgaagaccgttttctataactcccccgtaccggaccggcttg
atcaggtctccgagtggggttatcaacgggggagatggttatcaggaacgtgctggtaca
cccaaaagtttgcttctagcaataaggtcaccgtttgatcggttattcgctggaaaaaac
aatgtaggtgaacgttcttaccttagatccggtgatgcgagtcctgtgtag
DBGET
integrated database retrieval system
