Brassica napus (rape): 106345788
Help
Entry
106345788 CDS
T04128
Name
(RefSeq) trafficking protein particle complex II-specific subunit 130 homolog
KO
K20307
trafficking protein particle complex subunit 10
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bna04131
]
106345788
Membrane trafficking [BR:
bna04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
106345788
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAPPC10_1st
TRAPPC10
Foie-gras_1
NTS_TR130
TPR_2
Motif
Other DBs
NCBI-GeneID:
106345788
NCBI-ProteinID:
XP_048598771
LinkDB
All DBs
Position
A10:complement(9479191..9486597)
Genome browser
AA seq
1249 aa
AA seq
DB search
MANYLAQFQTVKNSCDRVVAAVEDVSDLWPTVKGLFEEHQPLKRALLTNNRTRNPVLVHN
LPVEFILTTDARLRSRSPQEQFLFWFREPYATLLLVTCEDLDEFKNILKPRLKLIVQNDE
REWFIVFVSKAHPSNDQATKSFKKVYAKLEVDFSSKKRERCCKLDIHGPNANFWEDLELK
ITECIRNTLDRRVLFYEDEIRKLTEQRFMPIWNFCNFFILKESLAFIFEMAHLHEDALRE
YDELELCYLETVNMPGKQREFGGFDSEDDKATLLKPGSKPLTQIVQDDSFREFDFRQYLF
ACQSRLLFKLNRPSEVSSRGYSFVISFAKALTLHESVLPFCLREVWVINACLALLDATSS
HNHDGVVAPDIEKEFYRLQGDLYSLARVKFMRLGYLIGYGTDIEKSPLNSACLSMLPWPK
PAVWPSLPPDASSEVLEKEKTILQATSRTKHFGIQRKPLPLEPSVLLRVANRRRASLSTG
NIPEIFDGRPGFTEGSGLEASPRAPPMSRTNSSPGNFESPLDRPMRLAEIFVAAEHALRL
TISDHDLLKALSSTQDFEHKYLNLTKGAAENYHRSWWKRHGVVLDGEIAAVCFKHGKYDL
AANSYEKVCALYAGERWQDLLAEVLPNLAECQKNLNDHAGYMSSCVRLLSLDKGLFSPKE
RQAFQIEVVNLAHSEMENPVPLDVSSLITFSGSTGPPLQLCDGDPGTLPVTVWSGFPDDI
TLDSLSLTLVATNNTDEGGQALKSSAATVLKPGRNTITFALPPQKPGSYVLGVVTGQIGR
LRFRSHSFSKGRPADTDDFMSYEKPTRPILKVSKPRALVDLASAVSSALLINEAQWIGII
VHPINYSLKGAILHIDTGPGLKIEDSYGIEMERYVETDCDAGTSKAEVSVEDSPVSPKQD
SEVLNLCDGKIVFSEWASNVSSIMWVPVRALSEKLARGSSSVTPLKQDILEGMRTVALKL
EFGVHHNQIFERTVAAHFTDPFDVTTRVVNKCNDGTMVMQVMLHSLVKANLIVLDAWLDL
QEGFVHGKRDGRPTSTFFPLVVSPGSRAAVVFSISLDKTMSSGKDLQLPESILNIKYEIN
GDRTAGAHKPVDADHSGSDSERRALVFKSAIVLQRPVLDPCLTVGFLPLPSDGLRVGKLI
TMQWRVERLKELKGSEAVEHDEVLYEVNANSENWMIAGRKRGHVSLSEEKGSRVVISILC
VPLVAGYVRPPQLSLPNVEEENVRSNPPGPHLVCVLPPLLSSSYCVPVK
NT seq
3750 nt
NT seq
+upstream
nt +downstream
nt
atggcgaactatttggctcagttccagacggttaagaattcatgcgatcgcgtcgtcgcc
gccgtcgaagatgtgtctgatctgtggcccacggttaaaggtttgtttgaagaacatcag
ccattgaaaagagccttgttgacaaacaacaggactcgtaaccccgtgctcgttcacaac
ttgcccgttgaattcatactaactacagacgccagacttcgaagtcgatctcctcaggag
cagttcttgttctggttccgagaaccttatgcaactttacttcttgtcacctgtgaggat
cttgatgagtttaaaaacattcttaaaccacgtctgaaattaattgtccagaacgatgag
agggaatggtttattgtatttgtatctaaggctcacccaagtaatgaccaagctactaaa
tctttcaagaaagtgtatgctaagcttgaagttgatttcagttctaaaaagagagaaagg
tgctgtaagctggatatacatggccccaatgcaaatttttgggaggatctagaattgaag
attaccgagtgcatcaggaataccttggataggcgcgttctattctacgaggatgagata
cgcaagctcaccgagcagcggtttatgccaatatggaacttttgtaacttcttcatcctg
aaggaaagtttggcttttatatttgagatggctcatcttcatgaagatgcattacgtgaa
tatgatgaactagagctctgctatttggaaacagttaatatgcctggaaaacagagggaa
tttggaggattcgacagtgaagatgataaagctacgctgctgaaaccaggaagcaaacca
ttgacacagattgtgcaagatgattcttttagagaattcgattttagacagtatctcttt
gcctgtcaatccaggctgttgttcaagttgaatcgtccttctgaagtttcatccaggggt
tactcttttgttatcagttttgcaaaggcgttgaccctccatgagagtgtgcttcccttc
tgtttgcgggaagtttgggtaattaatgcgtgtttagcgctgctcgatgcaacttcttct
cataaccatgatggagttgttgcacctgatattgagaaggaattctaccgtcttcagggg
gatctctattctcttgcacgggttaagttcatgagacttggatatctgataggatatgga
acagacatagaaaaaagtccactgaacagtgcttgtctcagtatgctgccttggccaaaa
ccggcagtctggccatctcttccaccagatgcttcctctgaggtgcttgaaaaagaaaag
actattcttcaagcaacgtcaaggaccaagcactttggtattcaacggaaacctttaccc
cttgaaccatctgttcttctacgtgtggctaacagaagaagggcttctctttctactgga
aatattcctgaaatatttgatggccgcccaggttttactgaaggatcaggtttagaagcg
tctccgagagcacctcccatgtcaagaacaaattcttcacctggaaattttgaaagtccg
ctagataggcctatgaggcttgctgaaatttttgttgccgctgagcatgcactgaggctt
accatttcagatcatgatttgttgaaggcattgtcatctactcaggatttcgagcataaa
tatcttaatctaaccaaaggtgctgctgaaaactatcaccgttcttggtggaagagacat
ggagtcgttcttgatggtgaaattgcagctgtatgcttcaagcacgggaaatatgatttg
gctgcaaactcttatgaaaaagtttgtgctctttatgcgggtgaaagatggcaagatcta
ctggcagaagtcttgcccaatctagccgagtgtcaaaagaatcttaatgatcacgctgga
tacatgtcatcttgtgttaggctactttcgttggataagggtttattctcccccaaggag
cggcaagcttttcagatcgaggttgtcaatcttgcacacagtgaaatggaaaacccagtt
cccttagatgtatcgtcattgatcacattttctggaagtactggccctccgcttcagtta
tgcgatggagaccctggaactctaccagttactgtgtggagtggctttcctgatgatatc
acccttgattcgcttagtcttaccttagtagccaccaacaacaccgacgaaggcggccag
gccttaaagagttctgctgcaactgtgctaaagcccggaaggaataccatcacatttgct
ctgcctccacaaaaacctggttcttatgtcttgggagttgttactggtcagattgggcgc
ttgagattcaggtctcacagcttttcgaaaggtcgtcctgcggatactgatgacttcatg
agttatgaaaagccaaccagacctatcctgaaggtttccaaaccaagagctctggttgat
cttgcttcagcagtatcttctgcgctgcttataaatgaagcacagtggattggtatcata
gtacatcctataaattactcactgaaaggcgccatcttgcacattgacactggtccgggg
ctaaagattgaagactcatacggcattgagatggagagatacgtggaaacagattgtgat
gctggtacatcaaaagctgaagtttctgtagaagatagccctgtctctccaaaacaggat
tcagaggtacttaacctctgcgatggtaaaatagttttctcagaatgggcaagcaatgtc
agttctattatgtgggttcctgttcgtgcattgagtgagaagcttgccagaggttcatct
tcagtcactccactgaaacaagatattctagagggaatgagaactgtagctttaaaactt
gaatttggggtgcatcataaccagatatttgagagaaccgtagcggcacattttaccgac
ccttttgacgtgactacaagggtcgtaaacaaatgcaacgatggcactatggtcatgcag
gttatgctacactcccttgtcaaggccaacttgatagttcttgatgcttggcttgatctt
caagaaggatttgttcatggaaaaagggatggaagacctacatcaacattctttccgctt
gttgtgtccccagggtctagagcagccgttgtgttcagtatatccctagataagacgatg
tcctcagggaaagatttgcaactaccagagagcatcctgaatatcaaatatgaaatcaat
ggtgatagaaccgctggagcacacaaaccagtggatgcagatcactctggatctgattct
gaaaggagagctttggtgttcaagagtgctatcgttttgcagcgtccagtgcttgatcct
tgccttacagttggatttctcccacttccttctgatggtcttagggtggggaaacttatt
accatgcagtggagagtcgagaggttgaaagaactcaagggaagtgaagccgtagaacat
gatgaagtgttatatgaagtcaatgcaaattcggagaattggatgattgcgggtaggaag
agaggccatgtgtctctctcagaagagaaaggttcaagagtagtaatctcgatactatgt
gtcccattagtagcgggttatgttcgtcctcctcagctcagtttgccgaacgtggaagaa
gaaaacgtaagaagcaatccaccgggtcctcacttagtgtgtgtcttgcctccacttctc
agttcttcctattgcgtccctgttaagtag
DBGET
integrated database retrieval system
