Brassica napus (rape): 106345823
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Entry
106345823 CDS
T04128
Name
(RefSeq) oligouridylate-binding protein 1A
KO
K13201
nucleolysin TIA-1/TIAR
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bna03019
]
106345823
03041 Spliceosome [BR:
bna03041
]
106345823
Messenger RNA biogenesis [BR:
bna03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
106345823
Spliceosome [BR:
bna03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
106345823
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_occluded
RRM_5
Motif
Other DBs
NCBI-GeneID:
106345823
NCBI-ProteinID:
XP_013640464
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Position
A6:549858..552990
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AA seq
420 aa
AA seq
DB search
MQNPRLKQQQQQQQAMMQQALMQQHHSLYHPSLMAPPPPPQMEPLPSGNLPPGFDPTTCR
SVYAGNIHTQVTEVLLQEIFASTGPVESCKLIRKDKSSYGFVHYFDRRSAGLAIMSLNGR
HLFGQPIKVNWAYATGQREDTSSHFNIFVGDLSPDVTDAALFESFSAFNTCSDARVMWDQ
KTGRSRGFGFVSFRNQQDAQNAINEMNGKWLSSRQIRCNWATKGATFGEDKHSSDGKSVA
ELTNGSEDGREISITNEEAPENNPQYTTVYVGNLAPEVTQLDLHRLFHTLGAGVIEEVRV
QRDKGFGFVRYNTHDEAALAIQMGNSQPFLFNRQIKCSWGNKPTPIGTASNPLPPPAPVA
VPGLSSMDLLAYERQLALAKMHPQAQHSLRHVNAAGASAAMYDGGFQNVAAAHQQLMYYQ
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgcagaatccgaggctcaaacaacagcagcaacagcaacaagctatgatgcagcaagcg
ttgatgcaacaacaccactctctctatcatcctagccttatggctcctcctccccctcct
cagatggagcctctaccaagtggaaaccttcctcctggttttgatcccactacttgccgc
agtgtgtatgctggcaacattcacacgcaggtcactgaggttcttcttcaagagattttt
gctagcaccggtcctgttgagagctgtaagctcatcagaaaggataagtcatcatatgga
tttgttcactactttgatcgaagatctgctggtttggctatcatgtctcttaacggaagg
catctgtttggacagcctatcaaagttaactgggcgtatgctactggtcaaagggaagac
acatcaagccatttcaacatttttgttggagatctcagtccagatgttactgatgcagct
ttgtttgagagcttctctgccttcaacacttgctcggatgcaagagtaatgtgggaccag
aaaactggacgctcaagaggctttgggtttgtttccttccgcaatcagcaggatgctcaa
aatgccataaatgaaatgaatggtaaatggttaagtagcagacaaatcagatgcaactgg
gcgaccaaaggtgctacttttggggaggacaaacatagctctgatggcaaaagtgtcgct
gaactcacaaacggctcagaggatggtagagagatctcaatcacaaacgaagaagctcct
gaaaacaatcctcagtacaccactgtgtatgtaggaaacctcgctccagaagtaactcag
cttgatctacaccgcctgttccatacacttggcgctggagtgattgaagaggtccgtgtc
cagcgagacaaaggctttggttttgtgagatacaacactcatgacgaggctgcgcttgct
attcagatgggcaactctcagcctttcctcttcaacagacagataaagtgttcatgggga
aacaaaccaactccaataggcacagcctcaaacccgcttccaccaccagcgccagtggca
gtccctggtctgtcctcaatggacctcttagcctatgagaggcaactggctttagctaag
atgcatcctcaggctcagcattctctaaggcatgtcaatgcagctggagcaagtgctgct
atgtatgatggtggttttcagaatgtagctgcggcgcatcagcagctcatgtactatcag
taa
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