Brassica napus (rape): 106345885
Help
Entry
106345885 CDS
T04128
Name
(RefSeq) probable pectinesterase/pectinesterase inhibitor 59
KO
K01051
pectinesterase [EC:
3.1.1.11
]
Organism
bna
Brassica napus (rape)
Pathway
bna00040
Pentose and glucuronate interconversions
bna01100
Metabolic pathways
Module
bna_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
106345885
Enzymes [BR:
bna01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.1 Carboxylic-ester hydrolases
3.1.1.11 pectinesterase
106345885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectinesterase
PMEI
Alk_phosphatase
Scramblase
Motif
Other DBs
NCBI-GeneID:
106345885
NCBI-ProteinID:
XP_013640546
LinkDB
All DBs
Position
A3:6804771..6806942
Genome browser
AA seq
527 aa
AA seq
DB search
MMHKISYLLRLLLPFLLCLHLLTTVSGIDQWCYKTPYPDPCKRYFINRNGFRPPTQLSDF
RVMLVEAAMHRAISARDALASSSLNCTDGQKQAVFADCIDLYGDTIMQLNRTLECMSPKA
SCTDFDAQTWLSTALTNTETCRHGTTDFNVSDFITPIVSKTEISNLMSNCLAVNGALLTA
ANNGNRKDFPTWVSGKERRLLQSQSERAVRANLVVAKDGSGHVTTVQAAIDVAGRRKVTS
GRFIIYVKRGVYEENINVRRNNDNIMLVGDGMRSTIITGYRSVKDGYTTYNSATAGIEGL
HFIAKGLTFRNTAGPAKGQAVALRSSSDLSIFYQCSIEGYQDTLLVHSQRQFYRDCYIYG
TVDFIFGNAAAVFQNCLILPRRPLEGQANVITAQARAYPFQNTGISIHNSTILPAPDLIP
VIGNVKTYMGRPWMKYSRTVVLQTYLDSVVCPLGWSPWLKGSDFGLDTLFYAEYNNIGPA
SSTSGRVRWKGFHVLNRASDASAFTVGSFIAGTAWLPGTGIPFNSGL
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgatgcacaaaatctcttatcttctacgtttactattaccatttctactctgtctccat
cttctcaccactgtatccggcattgaccagtggtgctacaaaactccttaccctgatcca
tgcaaacgctactttataaaccgtaacggttttcgacctcccacacaactatccgatttt
cgagtaatgcttgttgaagcagccatgcatcgggcgatatctgctcgggacgcgctggct
agttccagccttaactgtactgatggccagaaacaagccgttttcgcagactgcatcgac
ctctacggagacactatcatgcagctgaaccggacgctagagtgcatgtccccaaaagct
agttgcaccgacttcgatgctcagacgtggctgagcaccgcacttacaaacaccgagacc
tgccgacacggcacaacagatttcaacgtttccgatttcatcacacctatcgtttcaaag
accgaaatatccaatctcatgagcaactgcttagccgtcaacggagccctcttgaccgcc
gcaaacaatggtaatcggaaggattttccgacgtgggtttccgggaaagagagaagactt
ctacaatcgcaatctgagcgtgctgtccgagctaacctcgtggtggccaaagacgggtcg
ggacacgtcacgacggtgcaagcggctattgacgtggctggacggagaaaggtgacgtca
gggaggtttattatatacgtgaagagaggagtatatgaagaaaacataaacgtacgtcgc
aataacgataatataatgttggtcggagatggaatgagatctaccattatcaccggttat
cgtagtgtcaaagatggttacaccacctacaattccgccactgctggtatcgagggactt
cacttcatagccaaaggcctaacattccggaacacggcgggtccagccaagggccaagcc
gtggcactccgatcatcctcagacctatcaatcttctaccaatgctcaattgaaggatac
caagacacattattggtccactcccaacgccagttttaccgtgactgctacatttacgga
accgtagatttcatatttggaaacgcggccgcagtcttccaaaactgtctcatcctccca
cgccgcccgctcgagggtcaagccaatgtaataaccgcgcaagctcgtgcatatccattt
cagaacactggaatttccattcataactcaactatcctaccggctcctgatctaataccg
gtgatcggtaacgttaagacgtacatggggaggccgtggatgaagtactcacgcaccgtg
gttctccagacgtatttggatagtgttgtttgtccgttgggttggtcgccgtggcttaaa
ggttcggatttcggtttagacacattgttctacgcggaatataataatataggaccagct
tcgtccacgagcgggcgtgttcgttggaaagggtttcatgtgttgaatagagcttccgat
gcatctgctttcactgttggaagcttcatcgccggtactgcgtggctcccaggcaccggc
atacccttcaattctggactctaa
DBGET
integrated database retrieval system
