Brassica napus (rape): 106345931
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Entry
106345931 CDS
T04128
Name
(RefSeq) trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM2
KO
K12450
UDP-glucose 4,6-dehydratase [EC:
4.2.1.76
]
Organism
bna
Brassica napus (rape)
Pathway
bna00541
Biosynthesis of various nucleotide sugars
bna01100
Metabolic pathways
bna01250
Biosynthesis of nucleotide sugars
Module
bna_M01021
UDP-L-Rha biosynthesis, UDP-Glc => UDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
106345931
Enzymes [BR:
bna01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.76 UDP-glucose 4,6-dehydratase
106345931
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
3Beta_HSD
Polysacc_synt_2
NAD_binding_4
NAD_binding_10
NmrA
Motif
Other DBs
NCBI-GeneID:
106345931
NCBI-ProteinID:
XP_013640606
UniProt:
A0A078GG23
A0ABQ8CU81
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Position
A6:834986..837974
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AA seq
665 aa
AA seq
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MATEYKPKNILITGAAGFIASHVANRLIRSYPDYKIVVLDKLDYCSDLKNLDPSFSSPNF
RFVKGDIASDDLVNYLLITENIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACK
VTGQIKRFIHVSTDEVYGETDEDAAVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGL
PVITTRGNNVYGPNQFPEKMIPKFMLLAMSGKPLPIHGDGSNVRSYLYCEDVAEAFEVVL
HKGEVGHVYNIGTKRERRVIDVARDICKLLGKDPEASIQFVENRPFNDQRYFLDDQKLKN
LGWCERTGWEDGLKKTMEWYTQNPEWWGDVSGALLPHPRMLMMPGGRVSDEKKDTSSNTV
QTFTVVTPNNKAHDPKDKASLKFLIYGKTGWIGGLLGKLCEKQGITYEYGKGRLEDRASL
MADIRSIKPTHVFNAAGLTGRPNVDWCESHKPETIRVNVAGTLTLADVCRENGLLMMNFA
TGCIFEYDAAHPEGSGIGFKEEDKPNFTGSFYSKTKAMVEELLREFDNVCTLRVRMPISS
DLNNPRNFITKISRYNKVVNIPNSMTILDELLPISIEMAKRNLRGIWNFTNPGVVSHNEI
LEMYKSYIEPGFKWSNFTVEEQAKVIVAPRSNNEMDGAKLSKEFPEMLPIKEALIKYVFE
PNKRT
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atggctactgaatataagcccaagaacattctcattacgggagctgctggattcattgct
tctcatgttgccaacagactcatccgtagctacccggattacaagatcgtcgtcttggac
aagcttgattactgctcagatctgaagaacctcgatccttcgttttcttccccaaacttc
aggttcgtgaaaggagatatcgctagtgatgacctcgttaactaccttctcatcactgaa
aacatcgacaccatcatgcactttgctgctcaaacccatgtcgataactctttcggtaac
agctttgagtttaccaagaacaatatttacggtactcatgttcttttggaagcctgcaaa
gtaactggacagatcaagaggtttatccatgtgagtaccgatgaagtctatggagaaaca
gatgaggacgctgctgttggaaaccatgaagcttctcagcttttaccgacgaatccatac
tcagctactaaggctggcgctgagatgctggtgatggcttatggtagatcatatggttta
ccggttatcacaactcgtggcaacaatgtttatggtcctaaccagttccctgagaaaatg
attcctaagttcatgttgttggctatgagtgggaagccgcttcccatccatggagatgga
tctaacgtcaggagttacttatactgtgaagacgttgctgaagcctttgaggttgttctt
cacaaaggagaagtgggtcacgtctacaatattggaacaaagagagaaagaagagtgatt
gatgtggcgagagacatctgcaaactcttagggaaagatcctgaagcaagcattcagttt
gtggagaatcgaccctttaatgatcaacgatacttccttgatgatcagaagctgaagaat
cttggatggtgtgagcgaaccgggtgggaagatggattgaagaagacgatggaatggtac
actcagaaccctgagtggtggggtgatgtctctggagctttgcttcctcacccgaggatg
cttatgatgcccggtggtagagtttctgacgagaagaaagacacatcaagcaacaccgtc
cagacatttactgttgtaacaccaaacaacaaggctcatgatcctaaagacaaagcctcg
ttgaagtttctgatctatggcaagactggttggatcggtggtcttctagggaaattatgt
gagaagcaagggatcacatatgagtatgggaaaggacggttggaggatagagcttctctc
atggcggatattcgtagcatcaagcctactcatgtctttaacgctgctggtttaactggg
agacctaatgtggactggtgtgaatctcacaagccagagactattcgtgtcaatgtcgct
ggtactttgactcttgcagatgtttgcagagagaatggtctcttgatgatgaacttcgcc
accggttgcatctttgagtatgacgctgcacatcctgagggttcgggtataggtttcaag
gaagaagacaagcctaacttcaccggttctttctactcaaaaaccaaagccatggttgag
gagcttttgagagagtttgacaatgtatgtaccttgagagtgcggatgcccatctcgtca
gacctaaacaacccacgaaacttcatcaccaagatttcgcgctacaacaaagtggtgaac
atccccaacagtatgaccatactggacgagcttctcccaatctccatcgagatggccaag
agaaacctaagagggatatggaacttcaccaacccaggggtggtgagtcacaacgagata
ctcgagatgtacaagagctacatcgagccaggttttaaatggtccaacttcacagttgaa
gaacaagcaaaggtcattgttgctcctcgaagcaacaatgaaatggatggtgctaaacta
agcaaggagttcccagagatgttacccattaaagaggcactgatcaaatacgtctttgaa
ccaaacaagagaacctga
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