KEGG   Brassica napus (rape): 106346124
Entry
106346124         CDS       T04128                                 
Name
(RefSeq) elongator complex protein 2
  KO
K11374  elongator complex protein 2
Organism
bna  Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:bna00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:bna03016]
    106346124
Transfer RNA biogenesis [BR:bna03016]
 Eukaryotic type
  tRNA modification factors
   Elongator complex
    106346124
SSDB
Motif
Pfam: WD40 Beta-prop_THOC3 Beta-prop_WDR5 Beta-prop_WDR3_1st WD40_Prp19 WD40_CDC20-Fz Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 Beta-prop_WDR3_2nd WDR55 WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_TEP1_2nd Beta-prop_Aladin EIF3I Beta-prop_RIG_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_EIPR1 ANAPC4_WD40 Beta-prop_IFT140_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR35_TULP_N Beta-prop_WDR90_POC16_2nd Beta-prop_BBS7 Beta-prop_IFT122_1st NBCH_WD40 WDR90_beta-prop_4th Beta-prop_HPS5 Beta-prop_SPT8 Beta-prop_NUP159_NUP214 MIOS_WD40 Beta-prop_Vps41 WD40_RFWD3
Other DBs
NCBI-GeneID: 106346124
NCBI-ProteinID: XP_013640834
LinkDB
Position
A6:2305594..2309225
AA seq 821 aa
MSENTEVEAKRVFIGAGCNRVVNNVSWGASGLVSFGAQNAVAIFCPKTAQILTTLPGHKA
SVNCTHWLPSSKFAFKAKHLDRHYLLSGDTDGVIILWELSTNSNNWRHVLQLPQSHKKGV
TCITAFMCSETDAMFASGSSDGVVNVWDVSFPSKPSDECKVSCLDSISADSKAIVTLSLA
ELPQNPGRFTLAMGGLDNKIKLYCGERTGKFTSVCELKGHTDWIRSLDFSLPREETTNSI
MLVSSSQDKVIRIWKLVLVGDVGSWQREITLASYIEGPVFVSGRFTYQVSVESVLIGHED
WVYSVEWQPPVDHHQPLSILSASMDKTMMIWRPEKKTGVWVNVVCVGELSHCALGFYGGH
WSPDGVSILAHGYGGSFHLWRNVGSSKESENWQMQKVPSGHFAAVTDITWARTGEYLLSV
SHDQTTRVFSSWKSDEEDEHWHELARPQVHGHDINCVAMVQGKGNHRFVSGAEEKVVRVF
EAPLSFLKTLKHTCAGGEGSFPENLQADVQVLGANMSALGLSQKPIYLHSSSEPLERNGG
GEGLETFETVPEAAPVELKEPPIEDQLAFHTLWPESHKLYGHGNELFSLCCDHNGSLVAS
SCKAQSAAMAEIWLWEVGTWKAVGRLQSHSLTVTHLEFSYDDNLLLSVSRDRHFSVFSIQ
RTDDGEVSHKLMAKVEAHKRIIWACSWNPYGHQFATSSRDKTVKIWSIEKDAHVKQVLAL
PQFGSSVTAVAWTGLDQKEKSGCIAVGMESGLIELWNIKIKETEEEGTTATAALALRLEP
FMCHVSAVNRLAWRPTESNRSLLRLTSCGDDNCVRVFDFKF
NT seq 2466 nt   +upstreamnt  +downstreamnt
atgtcggaaaacaccgaagtggaagcgaagagagtgttcataggagcaggatgcaacaga
gtcgtcaacaacgtctcttggggagcttctggtctcgtttccttcggtgctcaaaacgcc
gttgctattttctgccctaagacagcccagattcttacaacgcttccaggtcacaaagct
tctgtcaattgcactcattggttacctagttccaagtttgcattcaaagccaagcatttg
gaccggcattatctgctctcaggtgatacagatggtgtcatcatcctttgggagctatca
actaacagtaacaattggagacatgtgctacagcttccacagtctcataagaaaggtgta
acttgcatcactgcgtttatgtgttctgaaaccgatgcaatgtttgcttctggttcttca
gatggagttgtgaatgtctgggatgtttcttttccatcaaagcctagtgatgaatgtaaa
gtttcgtgcttggactccatctctgccgactccaaagcaattgtaacgctttcgttagcg
gaactgcctcaaaatcctggaagattcaccctcgccatgggtggactagacaacaaaatc
aaactgtactgtggagaaagaacggggaagttcacttctgtctgtgagcttaaaggccac
acggactggatcaggagtttggacttctctttaccaagagaagaaaccaccaatagtatt
atgcttgtgagttcttcccaggacaaagtcattcgaatctggaagcttgtgttagtaggt
gatgttggctcatggcaaagagagatcactcttgcttcttacattgaaggtcctgttttc
gtctcagggaggttcacatatcaggtttcagtggaatctgttctcattggacatgaagat
tgggtctattccgtggagtggcagcctccagtggaccaccaccaaccgttgagtatttta
tcggcttcaatggacaagacgatgatgatttggcgacctgagaagaaaacgggtgtgtgg
gttaacgttgtgtgtgttggagagcttagtcactgtgctcttggcttctacggtggccac
tggagcccggatggtgtgtccatccttgctcatgggtatggtggatcttttcatctctgg
agaaatgttggtagcagcaaagagtctgagaactggcagatgcagaaagtcccttcaggt
cattttgctgctgttactgacattacgtgggctagaaccggcgagtacttgctatccgtg
agccacgatcagaccactcgggtgttctcgtcatggaagagtgatgaggaggatgagcat
tggcatgagctggctcgtcctcaggttcatggtcatgacattaactgtgtggcaatggtt
caaggcaaaggcaaccaccgttttgtaagtggagcggaggagaaagttgtgagagttttt
gaggctcctctgtctttcttgaagacactgaaacacacttgtgccggaggagaaggaagc
ttccctgagaatttacaagcagatgtgcaggtccttggggcgaacatgtctgctcttggt
ttatcacagaagcctatctacttacactcttctagtgaacctttagagagaaatggggga
ggagaaggtttggagacatttgaaacggttccagaggctgctccagtggagttgaaggag
cctccaattgaagatcagcttgcgtttcatactttatggcctgagtctcataaactctat
ggtcatggtaatgaactcttttctctctgctgtgaccacaacggaagccttgttgcttca
tcgtgtaaggctcaatctgcagccatggcggagatatggttatgggaggttgggacatgg
aaagctgttggtcgtttgcaatcccacagcttgacagtgacacacttggagttctcttat
gacgacaatctgctcttgtccgtctccagagatcgtcacttctcagtgttctctatccaa
agaacagatgatggagaggttagtcacaaactcatggcaaaggtcgaagcacacaagagg
atcatctgggcatgttcatggaacccatatggccatcagttcgcaacttcatcaagagac
aagactgtgaagatctggtccatcgagaaagacgctcacgtcaaacaggttcttgccttg
cctcagttcgggagcagtgtcacagccgtggcttggacgggactagaccagaaggagaag
agcgggtgcatagctgttgggatggagagtggactgattgagctgtggaacataaagatt
aaagaaacagaggaagaaggtacaacagcaacagcagctcttgctctgaggcttgaaccg
ttcatgtgtcatgtctcggctgtgaaccggttagcatggagaccaaccgagagtaaccgg
agtttgctgaggttaacttcttgtggggatgataattgtgttagagtttttgacttcaag
ttctga

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