Brassica napus (rape): 106346124
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Entry
106346124 CDS
T04128
Name
(RefSeq) elongator complex protein 2
KO
K11374
elongator complex protein 2
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bna03016
]
106346124
Transfer RNA biogenesis [BR:
bna03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
106346124
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Beta-prop_THOC3
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_WDR3_2nd
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_TEP1_2nd
Beta-prop_Aladin
EIF3I
Beta-prop_RIG_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_EIPR1
ANAPC4_WD40
Beta-prop_IFT140_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_WDR90_POC16_2nd
Beta-prop_BBS7
Beta-prop_IFT122_1st
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_HPS5
Beta-prop_SPT8
Beta-prop_NUP159_NUP214
MIOS_WD40
Beta-prop_Vps41
WD40_RFWD3
Motif
Other DBs
NCBI-GeneID:
106346124
NCBI-ProteinID:
XP_013640834
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Position
A6:2305594..2309225
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AA seq
821 aa
AA seq
DB search
MSENTEVEAKRVFIGAGCNRVVNNVSWGASGLVSFGAQNAVAIFCPKTAQILTTLPGHKA
SVNCTHWLPSSKFAFKAKHLDRHYLLSGDTDGVIILWELSTNSNNWRHVLQLPQSHKKGV
TCITAFMCSETDAMFASGSSDGVVNVWDVSFPSKPSDECKVSCLDSISADSKAIVTLSLA
ELPQNPGRFTLAMGGLDNKIKLYCGERTGKFTSVCELKGHTDWIRSLDFSLPREETTNSI
MLVSSSQDKVIRIWKLVLVGDVGSWQREITLASYIEGPVFVSGRFTYQVSVESVLIGHED
WVYSVEWQPPVDHHQPLSILSASMDKTMMIWRPEKKTGVWVNVVCVGELSHCALGFYGGH
WSPDGVSILAHGYGGSFHLWRNVGSSKESENWQMQKVPSGHFAAVTDITWARTGEYLLSV
SHDQTTRVFSSWKSDEEDEHWHELARPQVHGHDINCVAMVQGKGNHRFVSGAEEKVVRVF
EAPLSFLKTLKHTCAGGEGSFPENLQADVQVLGANMSALGLSQKPIYLHSSSEPLERNGG
GEGLETFETVPEAAPVELKEPPIEDQLAFHTLWPESHKLYGHGNELFSLCCDHNGSLVAS
SCKAQSAAMAEIWLWEVGTWKAVGRLQSHSLTVTHLEFSYDDNLLLSVSRDRHFSVFSIQ
RTDDGEVSHKLMAKVEAHKRIIWACSWNPYGHQFATSSRDKTVKIWSIEKDAHVKQVLAL
PQFGSSVTAVAWTGLDQKEKSGCIAVGMESGLIELWNIKIKETEEEGTTATAALALRLEP
FMCHVSAVNRLAWRPTESNRSLLRLTSCGDDNCVRVFDFKF
NT seq
2466 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaaaacaccgaagtggaagcgaagagagtgttcataggagcaggatgcaacaga
gtcgtcaacaacgtctcttggggagcttctggtctcgtttccttcggtgctcaaaacgcc
gttgctattttctgccctaagacagcccagattcttacaacgcttccaggtcacaaagct
tctgtcaattgcactcattggttacctagttccaagtttgcattcaaagccaagcatttg
gaccggcattatctgctctcaggtgatacagatggtgtcatcatcctttgggagctatca
actaacagtaacaattggagacatgtgctacagcttccacagtctcataagaaaggtgta
acttgcatcactgcgtttatgtgttctgaaaccgatgcaatgtttgcttctggttcttca
gatggagttgtgaatgtctgggatgtttcttttccatcaaagcctagtgatgaatgtaaa
gtttcgtgcttggactccatctctgccgactccaaagcaattgtaacgctttcgttagcg
gaactgcctcaaaatcctggaagattcaccctcgccatgggtggactagacaacaaaatc
aaactgtactgtggagaaagaacggggaagttcacttctgtctgtgagcttaaaggccac
acggactggatcaggagtttggacttctctttaccaagagaagaaaccaccaatagtatt
atgcttgtgagttcttcccaggacaaagtcattcgaatctggaagcttgtgttagtaggt
gatgttggctcatggcaaagagagatcactcttgcttcttacattgaaggtcctgttttc
gtctcagggaggttcacatatcaggtttcagtggaatctgttctcattggacatgaagat
tgggtctattccgtggagtggcagcctccagtggaccaccaccaaccgttgagtatttta
tcggcttcaatggacaagacgatgatgatttggcgacctgagaagaaaacgggtgtgtgg
gttaacgttgtgtgtgttggagagcttagtcactgtgctcttggcttctacggtggccac
tggagcccggatggtgtgtccatccttgctcatgggtatggtggatcttttcatctctgg
agaaatgttggtagcagcaaagagtctgagaactggcagatgcagaaagtcccttcaggt
cattttgctgctgttactgacattacgtgggctagaaccggcgagtacttgctatccgtg
agccacgatcagaccactcgggtgttctcgtcatggaagagtgatgaggaggatgagcat
tggcatgagctggctcgtcctcaggttcatggtcatgacattaactgtgtggcaatggtt
caaggcaaaggcaaccaccgttttgtaagtggagcggaggagaaagttgtgagagttttt
gaggctcctctgtctttcttgaagacactgaaacacacttgtgccggaggagaaggaagc
ttccctgagaatttacaagcagatgtgcaggtccttggggcgaacatgtctgctcttggt
ttatcacagaagcctatctacttacactcttctagtgaacctttagagagaaatggggga
ggagaaggtttggagacatttgaaacggttccagaggctgctccagtggagttgaaggag
cctccaattgaagatcagcttgcgtttcatactttatggcctgagtctcataaactctat
ggtcatggtaatgaactcttttctctctgctgtgaccacaacggaagccttgttgcttca
tcgtgtaaggctcaatctgcagccatggcggagatatggttatgggaggttgggacatgg
aaagctgttggtcgtttgcaatcccacagcttgacagtgacacacttggagttctcttat
gacgacaatctgctcttgtccgtctccagagatcgtcacttctcagtgttctctatccaa
agaacagatgatggagaggttagtcacaaactcatggcaaaggtcgaagcacacaagagg
atcatctgggcatgttcatggaacccatatggccatcagttcgcaacttcatcaagagac
aagactgtgaagatctggtccatcgagaaagacgctcacgtcaaacaggttcttgccttg
cctcagttcgggagcagtgtcacagccgtggcttggacgggactagaccagaaggagaag
agcgggtgcatagctgttgggatggagagtggactgattgagctgtggaacataaagatt
aaagaaacagaggaagaaggtacaacagcaacagcagctcttgctctgaggcttgaaccg
ttcatgtgtcatgtctcggctgtgaaccggttagcatggagaccaaccgagagtaaccgg
agtttgctgaggttaacttcttgtggggatgataattgtgttagagtttttgacttcaag
ttctga
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